AGO/RISC-mediated antiviral RNA silencing in a plant in vitro system. (Q30317853)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23535144%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

title

AGO/RISC-mediated antiviral RNA silencing in a plant in vitro system (English)

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27 February 2020

3

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27 February 2020

author name string

Jana Schuck

1

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27 February 2020

Torsten Gursinsky

2

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27 February 2020

Jozsef Burgyán

4

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27 February 2020

Sven-Erik Behrens

5

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27 February 2020

language of work or name

English

0 references

publication date

27 March 2013

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27 February 2020

number of pages

14

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based on heuristic

inferred from page(s)

published in

Nucleic Acids Research

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27 February 2020

volume

41

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27 February 2020

issue

9

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27 February 2020

page(s)

5090-5103

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Creative Commons Attribution-NonCommercial 3.0 Unported

27 February 2020

copyright license

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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ARGONAUTE2 mediates RNA-silencing antiviral defenses against Potato virus X in Arabidopsis.

3 June 2018

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3 June 2018

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Organelle-Like Membrane Compartmentalization of Positive-Strand RNA Virus Replication Factories

3 June 2018

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Argonaute quenching and global changes in Dicer homeostasis caused by a pathogen-encoded GW repeat protein.

3 June 2018

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Structural and functional analysis of viral siRNAs

3 June 2018

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RNA silencing: an antiviral mechanism

3 June 2018

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Nucleation, propagation and cleavage of target RNAs in Ago silencing complexes

3 June 2018

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Replication of Tomato bushy stunt virus RNA in a plant in vitro system

3 June 2018

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A Discontinuous RNA Platform Mediates RNA Virus Replication: Building an Integrated Model for RNA–based Regulation of Viral Processes

3 June 2018

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Small RNAs as guardians of the genome

3 June 2018

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Origins and Mechanisms of miRNAs and siRNAs

3 June 2018

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RNA-based viral immunity initiated by the Dicer family of host immune receptors

3 June 2018

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Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

The host Pex19p plays a role in peroxisomal localization of tombusvirus replication proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

3 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Antiviral immunity directed by small RNAs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Molecular basis for target RNA recognition and cleavage by human RISC.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

A systematic analysis of the effect of target RNA structure on RNA interference

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Molecular bases of viral RNA targeting by viral small interfering RNA-programmed RISC.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

RNAi-associated ssRNA-specific ribonucleases in Tombusvirus P19 mutant-infected plants and evidence for a discrete siRNA-containing effector complex

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Cucumber mosaic virus-encoded 2b suppressor inhibits Arabidopsis Argonaute1 cleavage activity to counter plant defense

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

An antagonistic function for Arabidopsis DCL2 in development and a new function for DCL4 in generating viral siRNAs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Small RNA binding is a common strategy to suppress RNA silencing by several viral suppressors

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Structure and function of RNA replication

3 June 2018

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AGO1 homeostasis entails coexpression of MIR168 and AGO1 and preferential stabilization of miR168 by AGO1

3 June 2018

1 reference

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Biological relevance of a stable biochemical interaction between the tombusvirus-encoded P19 and short interfering RNAs

3 June 2018

1 reference

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Specific binding of tombusvirus replication protein p33 to an internal replication element in the viral RNA is essential for replication

3 June 2018

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Perspective: machines for RNAi

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

3 June 2018

RNA silencing in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Advances in the molecular biology of tombusviruses: gene expression, genome replication, and recombination

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Effects and side-effects of viral RNA silencing suppressors on short RNAs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Molecular mechanism of RNA silencing suppression mediated by p19 protein of tombusviruses

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Replication of plant RNA virus genomes in a cell-free extract of evacuolated plant protoplasts

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Mfold web server for nucleic acid folding and hybridization prediction

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Prediction of plant microRNA targets

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Two classes of short interfering RNA in RNA silencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

A viral protein suppresses RNA silencing and binds silencing-generated, 21- to 25-nucleotide double-stranded RNAs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

RNA interference is mediated by 21- and 22-nucleotide RNAs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Suppression of gene silencing: a general strategy used by diverse DNA and RNA viruses of plants

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

A species of small antisense RNA in posttranscriptional gene silencing in plants

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

De novo generation of defective interfering RNAs of tomato bushy stunt virus by high multiplicity passage

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Identification of an ARGONAUTE for antiviral RNA silencing in Nicotiana benthamiana

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

The 21-nucleotide, but not 22-nucleotide, viral secondary small interfering RNAs direct potent antiviral defense by two cooperative argonautes in Arabidopsis thaliana

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

In vitro assembly of plant RNA-induced silencing complexes facilitated by molecular chaperone HSP90.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Deep-sequencing of plant viral small RNAs reveals effective and widespread targeting of viral genomes.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Cymbidium ringspot virus harnesses RNA silencing to control the accumulation of virus parasite satellite RNA.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

A simplified method for cloning of short interfering RNAs from Brassica juncea infected with Turnip mosaic potyvirus and Turnip crinkle carmovirus.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Hierarchical action and inhibition of plant Dicer-like proteins in antiviral defense.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Role of an internal and two 3'-terminal RNA elements in assembly of tombusvirus replicase

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Plant virus-derived small interfering RNAs originate predominantly from highly structured single-stranded viral RNAs.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

5'-3' RNA-RNA interaction facilitates cap- and poly(A) tail-independent translation of tomato bushy stunt virus mrna: a potential common mechanism for tombusviridae

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Host-specific generation and maintenance of Tomato bushy stunt virus defective interfering RNAs

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

Short defective interfering RNAs of tombusviruses are not targeted but trigger post-transcriptional gene silencing against their helper virus

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3643602

RNA-directed DNA methylation

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23535144

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKT193

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23535144%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23535144%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

PubMed publication ID

23535144

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23535144%20AND%20SRC:MED&resulttype=core&format=json