Protein structure. Engineering of a superhelicase through conformational control (Q30373810)

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5 March 2020

title

Protein structure. Engineering of a superhelicase through conformational control (English)

1 reference

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5 March 2020

author

Christopher D. Thomas

3

1 reference

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5 March 2020

Yann R. Chemla

4

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5 March 2020

Taekjip Ha

5

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5 March 2020

author name string

Sinan Arslan

1

1 reference

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5 March 2020

Rustem Khafizov

2

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5 March 2020

language of work or name

English

0 references

publication date

1 April 2015

1 reference

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5 March 2020

1 reference

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5 March 2020

volume

348

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5 March 2020

issue

6232

1 reference

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5 March 2020

page(s)

344-347

1 reference

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Elastic coupling between RNA degradation and unwinding by an exoribonuclease

5 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Rotations of the 2B Sub-domain of E. coli UvrD Helicase/Translocase Coupled to Nucleotide and DNA Binding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

PcrA helicase dismantles RecA filaments by reeling in DNA in uniform steps

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Insight into helicase mechanism and function revealed through single-molecule approaches

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

RepD-mediated recruitment of PcrA helicase at the Staphylococcus aureus pC221 plasmid replication origin, oriD.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Intersubunit coordination in a homomeric ring ATPase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Non-hexameric DNA helicases and translocases: mechanisms and regulation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Allosteric control of an ionotropic glutamate receptor with an optical switch.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Autoinhibition of Escherichia coli Rep monomer helicase activity by its 2B subdomain

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Single-molecule assay reveals strand switching and enhanced processivity of UvrD

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Forward and reverse motion of single RecBCD molecules on DNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

The 2B domain of the Escherichia coli Rep protein is not required for DNA helicase activity

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Controlling kinesin by reversible disulfide cross-linking. Identifying the motility-producing conformational change

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Escherichia coli MutL loads DNA helicase II onto DNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Plasmid replication initiator protein RepD increases the processivity of PcrA DNA helicase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep helicase bound to single-stranded DNA and ADP

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4417355

E. coli Rep oligomers are required to initiate DNA unwinding in vitro

20 June 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

A Dimer of Escherichia coli UvrD is the active form of the helicase in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

Bacillus stearothermophilus PcrA monomer is a single-stranded DNA translocase but not a processive helicase in vitro.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

Superfamily I helicases as modular components of DNA-processing machines.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

Kinetic measurement of the step size of DNA unwinding by Escherichia coli UvrD helicase

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

Kinetics of target site localization of a protein on DNA: a stochastic approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

Protein structure. Direct observation of structure-function relationship in a nucleic acid-processing enzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

DNA-binding orientation and domain conformation of the E. coli rep helicase monomer bound to a partial duplex junction: single-molecule studies of fluorescently labeled enzymes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

PcrA helicase tightly couples ATP hydrolysis to unwinding double-stranded DNA, modulated by the initiator protein for plasmid replication, RepD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

A practical guide to single-molecule FRET

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

THE USE OF CONFIDENCE OR FIDUCIAL LIMITS ILLUSTRATED IN THE CASE OF THE BINOMIAL

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

Sequence-dependent base pair stepping dynamics in XPD helicase unwinding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

Characterization of photoactivated singlet oxygen damage in single-molecule optical trap experiments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

Cysteines 431 and 1074 are responsible for inhibitory disulfide cross-linking between the two nucleotide-binding sites in human P-glycoprotein

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAA0445

Allosteric control through mechanical tension

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25883358

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Directional Loading and Stimulation of PcrA Helicase by the Replication Initiator Protein RepD

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25883358

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1126/SCIENCE.AAA0445

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883358%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25883358%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

PubMed publication ID

25883358

1 reference