A self-organizing algorithm for modeling protein loops. (Q30379997)

19 October 2017

A self-organizing algorithm for modeling protein loops. (English)

1 reference

19 October 2017

1 reference

Pu Liu

1

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19 October 2017

Fangqiang Zhu

series ordinal

2

1 reference

19 October 2017

Dmitrii N Rassokhin

series ordinal

3

1 reference

19 October 2017

Dimitris K Agrafiotis

series ordinal

4

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19 October 2017

21 August 2009

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PLOS Computational Biology

19 October 2017

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19 October 2017

5

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19 October 2017

8

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19 October 2017

e1000478

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Creative Commons Attribution 4.0 International

19 October 2017

start time

21 August 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Toward better refinement of comparative models: predicting loops in inexact environments

21 January 2018

1 reference

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On the kinematics of protein folding.

21 January 2018

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A kinematic view of loop closure

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000478

Protein-protein docking with backbone flexibility.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000478

Conformational analysis using distance geometry methods.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000478

Conformational sampling by self-organization.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000478

Stochastic proximity embedding

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000478

A distance geometry heuristic for expanding the range of geometries sampled during conformational search.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000478

On the effects of permuted input on conformational sampling of drug-like molecules: an evaluation of stochastic proximity embedding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000478

Self-organizing superimposition algorithm for conformational sampling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000478

Advanced biological and chemical discovery (ABCD): centralizing discovery knowledge in an inherently decentralized world

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000478

Configurational bias Monte Carlo: a new sampling scheme for flexible chains

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000478

Importance of anchor group positioning in protein loop prediction.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2719875

Conformational sampling using high-temperature molecular dynamics

26 November 2018

1 reference

12 December 2020

Predicting antibody hypervariable loop conformations. II: Minimization and molecular dynamics studies of MCPC603 from many randomly generated loop conformations

1 reference

12 December 2020

The role of loop 7 in mediating calcineurin regulation

1 reference

12 December 2020

Canonical structures for the hypervariable regions of immunoglobulins

1 reference

12 December 2020

10.1371/JOURNAL.PCBI.1000478

Identifiers

DOI

1 reference

19 October 2017

journals/ploscb/LiuZRA09

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

19 October 2017

PubMed publication ID

19696883

1 reference