Protein structure prediction: do hydrogen bonding and water-mediated interactions suffice? (Q30390517)

17 October 2017

Protein structure prediction: do hydrogen bonding and water-mediated interactions suffice? (English)

1 reference

protein structure prediction

17 October 2017

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author

Garegin A Papoian

series ordinal

3

1 reference

17 October 2017

Chenghang Zong

2

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Peter Guy Wolynes

series ordinal

4

object named as

Peter G Wolynes

1 reference

17 October 2017

Vanessa Oklejas

1

1 reference

17 October 2017

26 May 2010

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17 October 2017

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17 October 2017

52

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17 October 2017

1

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17 October 2017

84-90

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Protein Structure Prediction: The Next Generation.

17 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

Restriction versus guidance in protein structure prediction.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

Role of topology, nonadditivity, and water-mediated interactions in predicting the structures of alpha/beta proteins.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

P versus Q: structural reaction coordinates capture protein folding on smooth landscapes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

Protein structure prediction using Rosetta

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

Water in protein structure prediction

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

Some factors in the interpretation of protein denaturation

20 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

20 June 2018

https://api.crossref.org/works/10.1016%2FJ.YMETH.2010.05.006

Associative memory hamiltonians for structure prediction without homology: alpha-helical proteins.

7 January 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

JPred: a consensus secondary structure prediction server

20 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

20 June 2018

https://api.crossref.org/works/10.1016%2FJ.YMETH.2010.05.006

Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

7 January 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

A helix propensity scale based on experimental studies of peptides and proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

Self-consistently optimized energy functions for protein structure prediction by molecular dynamics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

Theory of protein folding: the energy landscape perspective

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

Toward an outline of the topography of a realistic protein-folding funnel

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

Toward protein tertiary structure recognition by means of associative memory hamiltonians

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

Optimizing physical energy functions for protein folding.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4145820

Local conformational signals and the statistical thermodynamics of collapsed helical proteins

26 November 2018

1 reference

Crossref

https://api.crossref.org/works/10.1016%2FJ.YMETH.2010.05.006

Statistical mechanical refinement of protein structure prediction schemes: Cumulant expansion approach

7 January 2021

1 reference

Crossref

https://api.crossref.org/works/10.1016%2FJ.YMETH.2010.05.006

THE weighted histogram analysis method for free-energy calculations on biomolecules. I. The method

7 January 2021

1 reference

Crossref

https://api.crossref.org/works/10.1016%2FJ.YMETH.2010.05.006

10.1016/J.YMETH.2010.05.006

7 January 2021

Identifiers

DOI

1 reference

release_2eaxv5nwengthptbrk3zgk64ri

17 October 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/2eaxv5nwengthptbrk3zgk64ri

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

4145820

1 reference

PMC publication ID

4145820

17 October 2017

PubMed publication ID

20561998

1 reference

PMC publication ID

4145820