Evolutionary information hidden in a single protein structure (Q30414685)

21 June 2017

title

Evolutionary information hidden in a single protein structure (English)

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21 June 2017

Chien-Hua Shih

1

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21 June 2017

Chih-Min Chang

2

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21 June 2017

Yeong-Shin Lin

3

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21 June 2017

Wei-Cheng Lo

4

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21 June 2017

Jenn-Kang Hwang

5

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21 June 2017

language of work or name

English

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publication date

27 March 2012

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21 June 2017

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21 June 2017

volume

80

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21 June 2017

issue

6

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21 June 2017

page(s)

1647-1657

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Scoring residue conservation

21 June 2017

cites work

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Rate4Site: an algorithmic tool for the identification of functional regions in proteins by surface mapping of evolutionary determinants within their homologues

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

A comparative study of conservation and variation scores

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Homology modeling using parametric alignment ensemble generation with consensus and energy-based model selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Modeller: generation and refinement of homology-based protein structure models

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

(PS)2: protein structure prediction server

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

A simple way to compute protein dynamics without a mechanical model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Flexibility and packing in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

On the relationship between the protein structure and protein dynamics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Deriving protein dynamical properties from weighted protein contact number.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Looking at enzymes from the inside out: the proximity of catalytic residues to the molecular centroid can be used for detection of active sites and enzyme-ligand interfaces.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

On the relationship between catalytic residues and their protein contact number.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Evolutionary conservation of protein backbone flexibility.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Three-dimensional structure of Escherichia coli dihydrodipicolinate reductase in complex with NADH and the inhibitor 2,6-pyridinedicarboxylate

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analog

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Structure, function, and evolution of transient and obligate protein-protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Protein sequence entropy is closely related to packing density and hydrophobicity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

ConSurf: an algorithmic tool for the identification of functional regions in proteins by surface mapping of phylogenetic information

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Predicting functionally important residues from sequence conservation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Protein elastic network models and the ranges of cooperativity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Comparison of site-specific rate-inference methods for protein sequences: empirical Bayesian methods are superior

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Prediction-based fingerprints of protein-protein interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

Network Analysis of Protein Structures Identifies Functional Residues

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24058

21 January 2018

Identifiers

DOI

10.1002/PROT.24058

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21 June 2017

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