Structural dynamics of the lac repressor-DNA complex revealed by a multiscale simulation (Q30475850)

6 November 2017

Structural dynamics of the lac repressor-DNA complex revealed by a multiscale simulation (English)

1 reference

6 November 2017

1

Elizabeth Villa

0 references

Klaus Schulten

series ordinal

3

object named as

Klaus Schulten

1 reference

6 November 2017

2

Alexander Balaeff

1 reference

6 November 2017

PMC publication ID

1100768

language of work or name

English

0 references

publication date

29 April 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

6 November 2017

1 reference

6 November 2017

102

1 reference

6 November 2017

19

1 reference

6 November 2017

6783-6788

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All-atom empirical potential for molecular modeling and dynamics studies of proteins

6 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

Fluorescence resonance energy transfer over approximately 130 basepairs in hyperstable lac repressor-DNA loops

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

Absolute comparison of simulated and experimental protein-folding dynamics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

Steered molecular dynamics and mechanical functions of proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

A closer view of the conformation of the Lac repressor bound to operator

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

The solution structure of Lac repressor headpiece 62 complexed to a symmetrical lac operator

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

VMD: visual molecular dynamics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

Simulating DNA at low resolution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

Crystal structure of the lactose operon repressor and its complexes with DNA and inducer

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

The elasticity of a single supercoiled DNA molecule

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

Crystal structure of lac repressor core tetramer and its implications for DNA looping

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

Classical electrostatics in biology and chemistry

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

Modeling superhelical DNA: recent analytical and dynamic approaches.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

Molecular dynamics simulations in biology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

The three operators of the lac operon cooperate in repression

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1100768

Structural basis for cooperative DNA binding by CAP and lac repressor.

20 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0409387102

Modelling DNA loops using continuum and statistical mechanics.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0409387102

Identifying unfolding intermediates of FN-III(10) by steered molecular dynamics

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0409387102

Reversible unfolding of individual titin immunoglobulin domains by AFM

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15863616

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

1 reference

https://pubmed.ncbi.nlm.nih.gov/15863616

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0409387102

1 reference

6 November 2017

0 references

1 reference

PMC publication ID

1100768

6 November 2017

PubMed publication ID

15863616

1 reference

PMC publication ID

1100768