Evolution of an antifreeze protein by neofunctionalization under escape from adaptive conflict (Q30497673)

28 September 2017

Evolution of an antifreeze protein by neofunctionalization under escape from adaptive conflict (English)

1 reference

28 September 2017

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Cheng Deng

1

1 reference

28 September 2017

C-H Christina Cheng

2

1 reference

28 September 2017

Hua Ye

3

1 reference

28 September 2017

Ximiao He

4

1 reference

28 September 2017

Liangbiao Chen

5

1 reference

28 September 2017

language of work or name

English

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publication date

29 November 2010

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Proceedings of the National Academy of Sciences of the United States of America

28 September 2017

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28 September 2017

107

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28 September 2017

50

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28 September 2017

21593-21598

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Adaptive evolution of energy metabolism genes and the origin of flight in bats

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Positive selection of a duplicated UV-sensitive visual pigment coincides with wing pigment evolution in Heliconius butterflies.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

In defense of statistical methods for detecting positive selection

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Distinguishing among evolutionary models for the maintenance of gene duplicates

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Reliabilities of identifying positive selection by the branch-site and the site-prediction methods

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Turning a hobby into a job: how duplicated genes find new functions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Escape from adaptive conflict after duplication in an anthocyanin pathway gene

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Viewing and editing assembled sequences using Consed

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Gene duplication and the adaptive evolution of a classic genetic switch

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

PAML 4: phylogenetic analysis by maximum likelihood

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Rapidly evolving zona pellucida domain proteins are a major component of the vitelline envelope of abalone eggs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

GenoProfiler: batch processing of high-throughput capillary fingerprinting data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Cloning, expression, and characterization of sialic acid synthases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Structural and mechanistic analysis of sialic acid synthase NeuB from Neisseria meningitidis in complex with Mn2+, phosphoenolpyruvate, and N-acetylmannosaminitol

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

The altered evolutionary trajectories of gene duplicates

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

MrBayes 3: Bayesian phylogenetic inference under mixed models

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

High-throughput fingerprinting of bacterial artificial chromosomes using the snapshot labeling kit and sizing of restriction fragments by capillary electrophoresis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Initial sequencing and analysis of the human genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Preservation of duplicate genes by complementary, degenerative mutations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

MODELTEST: testing the model of DNA substitution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Identification of the ice-binding surface on a type III antifreeze protein with a "flatness function" algorithm

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Evolution of antifreeze glycoprotein gene from a trypsinogen gene in Antarctic notothenioid fish

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Structural basis for the binding of a globular antifreeze protein to ice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Herring antifreeze protein: primary structure and evidence for a C-type lectin evolutionary origin.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Structure-function relationship in the globular type III antifreeze protein: identification of a cluster of surface residues required for binding to ice.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Genomic basis for antifreeze peptide heterogeneity and abundance in an Antarctic eel pout: gene structures and organization.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Metaphase and interphase fluorescence in situ hybridization mapping of the rice genome with bacterial artificial chromosomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

The recruitment of crystallins: new functions precede gene duplication.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Parallel adaptive origins of digestive RNases in Asian and African leaf monkeys

20 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007883107

The evolution of functionally novel proteins after gene duplication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007883107

Evidence for escape from adaptive conflict?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007883107

Replacement of the antifreeze-like domain of human N-acetylneuraminic acid phosphate synthase with the mouse antifreeze-like domain impacts both N-acetylneuraminic acid 9-phosphate synthase and 2-keto-3-deoxy-D-glycero-D-galacto-nonulosonic acid 9-p

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007883107

Structural characterization of sialic acid synthase by electrospray mass spectrometry--a tetrameric enzyme composed of dimeric dimers

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007883107

Antifreeze glycoprotein levels in Antarctic notothenioid fishes inhabiting different thermal environments and the effect of warm acclimation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007883107

Cenozoic deep-Sea temperatures and global ice volumes from Mg/Ca in benthic foraminiferal calcite

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3003108

Des Marais & Rausher reply

26 November 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1007883107

Sialic acid synthase: the origin of fish type III antifreeze protein?

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21115821

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Evolution of an antifreeze glycoprotein

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21115821

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1007883107

1 reference

28 September 2017

0 references

1 reference

28 September 2017

PubMed publication ID

21115821

1 reference