iMS2Flux--a high-throughput processing tool for stable isotope labeled mass spectrometric data used for metabolic flux analysis (Q30577216)

18 October 2017

iMS2Flux--a high-throughput processing tool for stable isotope labeled mass spectrometric data used for metabolic flux analysis (English)

1 reference

18 October 2017

1 reference

1 reference

2

Jan Huege

1 reference

18 October 2017

C Hart Poskar

1

1 reference

18 October 2017

Christian Krach

3

1 reference

18 October 2017

Mathias Franke

4

1 reference

18 October 2017

Yair Shachar-Hill

5

1 reference

18 October 2017

Björn H Junker

6

1 reference

18 October 2017

12 November 2012

1 reference

18 October 2017

1 reference

18 October 2017

13

1 reference

18 October 2017

295

1 reference

13CFLUX2--high-performance software suite for (13)C-metabolic flux analysis.

18 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Plant metabolomics and its potential for systems biology research background concepts, technology, and methodology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Mapping photoautotrophic metabolism with isotopically nonstationary (13)C flux analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Large-scale 13C-flux analysis reveals distinct transcriptional control of respiratory and fermentative metabolism in Escherichia coli

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Automated workflows for accurate mass-based putative metabolite identification in LC/MS-derived metabolomic datasets

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Modulation of the major paths of carbon in photorespiratory mutants of synechocystis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Systems-level metabolic flux profiling elucidates a complete, bifurcated tricarboxylic acid cycle in Clostridium acetobutylicum.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Metabolic turnover analysis by a combination of in vivo 13C-labelling from 13CO2 and metabolic profiling with CE-MS/MS reveals rate-limiting steps of the C3 photosynthetic pathway in Nicotiana tabacum leaves

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Systems-level metabolic flux profiling identifies fatty acid synthesis as a target for antiviral therapy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Metabolic profiling, metabolomic and metabonomic procedures for NMR spectroscopy of urine, plasma, serum and tissue extracts

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Nonsupervised construction and application of mass spectral and retention time index libraries from time-of-flight gas chromatography-mass spectrometry metabolite profiles

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Metabolic labeling of plant cell cultures with K(15)NO3 as a tool for quantitative analysis of proteins and metabolites

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

NMR analysis of plant nitrogen metabolism

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

FiatFlux--a software for metabolic flux analysis from 13C-glucose experiments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

GC-MS libraries for the rapid identification of metabolites in complex biological samples

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Chemical derivatization and mass spectral libraries in metabolic profiling by GC/MS and LC/MS/MS.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

GMD@CSB.DB: the Golm Metabolome Database

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

New tools for mass isotopomer data evaluation in (13)C flux analysis: mass isotope correction, data consistency checking, and precursor relationships.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Software tool for automated processing of 13C labeling data from mass spectrometric spectra.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Metabolic flux profiling of Escherichia coli mutants in central carbon metabolism using GC-MS.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

In vivo stationary flux analysis by 13C labeling experiments.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Mass isotopomer analysis: Theoretical and practical considerations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Correcting mass isotopomer distributions for naturally occurring isotopes

20 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

Large-scale in vivo flux analysis shows rigidity and suboptimal performance of Bacillus subtilis metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

Design of substrate label for steady state flux measurements in plant systems using the metabolic network of Brassica napus embryos.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

Central metabolic fluxes in the endosperm of developing maize seeds and their implications for metabolic engineering.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

TagFinder for the quantitative analysis of gas chromatography--mass spectrometry (GC-MS)-based metabolite profiling experiments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

Elimination of the concentration dependence in mass isotopomer abundance mass spectrometry of methyl palmitate using metastable atom bombardment

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

Probing in vivo metabolism by stable isotope labeling of storage lipids and proteins in developing Brassica napus embryos

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

Compartment-specific labeling information in 13C metabolic flux analysis of plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

Metabolic labeling of model organisms using heavy nitrogen (15N).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

Metabolic flux analysis at ultra short time scale: isotopically non-stationary 13C labeling experiments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

Kinetic flux profiling of nitrogen assimilation in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

The lack of mitochondrial AtFtsH4 protease alters Arabidopsis leaf morphology at the late stage of rosette development under short-day photoperiod.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

Gas chromatography mass spectrometry–based metabolite profiling in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

GC-EI-TOF-MS analysis of in vivo carbon-partitioning into soluble metabolite pools of higher plants by monitoring isotope dilution after 13CO2 labelling

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

Global urinary metabolic profiling procedures using gas chromatography–mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-295

Use of reverse-phase liquid chromatography, linked to tandem mass spectrometry, to profile the Calvin cycle and other metabolic intermediates in Arabidopsis rosettes at different carbon dioxide concentrations

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

OpenFLUX: efficient modelling software for 13C-based metabolic flux analysis

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Ion-Trap Mass Spectrometry Used in Combination with Gas Chromatography for High-Resolution Metabolic Flux Determination

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563546

Simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry

26 November 2018

1 reference

12 December 2020

Mass spectrometry for metabolic flux analysis

1 reference

12 December 2020

A universal framework for 13C metabolic flux analysis

1 reference

12 December 2020

Parallel determination of enzyme activities and in vivo fluxes in Brassica napus embryos grown on organic or inorganic nitrogen source

1 reference

12 December 2020

Measuring multiple fluxes through plant metabolic networks

1 reference

12 December 2020

Isotopic compositions of the elements 1997 (Technical Report)

1 reference

20 August 2023

https://opencitations.net/index/coci/api/v1/citations/10.1351/PAC199870010217

Identifiers

DOI

10.1186/1471-2105-13-295

1 reference

journals/bmcbi/PoskarHKFSJ12

18 October 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

18 October 2017

PubMed publication ID

23146204

1 reference