Probing the role of water in the tryptophan repressor-operator complex (Q30578686)

13 August 2017

Probing the role of water in the tryptophan repressor-operator complex (English)

1 reference

13 August 2017

M P Brown

1

1 reference

13 August 2017

A O Grillo

series ordinal

2

1 reference

13 August 2017

M Boyer

series ordinal

3

1 reference

13 August 2017

C A Royer

series ordinal

4

1 reference

13 August 2017

language of work or name

1 reference

1 June 1999

1 reference

13 August 2017

1 reference

13 August 2017

8

1 reference

13 August 2017

6

1 reference

13 August 2017

1276-1285

1 reference

In disperse solution, "osmotic stress" is a restricted case of preferential interactions

13 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Changes in solvation during DNA binding and cleavage are critical to altered specificity of the EcoRI endonuclease

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Affinity and specificity of trp repressor-DNA interactions studied with fluorescent oligonucleotides

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Probing protein hydration and conformational states in solution

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Participation of water in Hin recombinase--DNA recognition

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Water-mediated protein-DNA interactions: the relationship of thermodynamics to structural detail

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Macromolecules and water: probing with osmotic stress

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Improvements in the numerical analysis of thermodynamic data from biomolecular complexes.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

The control of protein stability and association by weak interactions with water: how do solvents affect these processes?

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Fluorescence anisotropy assays implicate protein-protein interactions in regulating trp repressor DNA binding

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Mutagenesis supports water mediated recognition in the trp repressor-operator system.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Tandem binding in crystals of a trp repressor/operator half-site complex

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Molecular recognition mediated by bound water. A mechanism for star activity of the restriction endonuclease EcoRI

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

The solution structures of the trp repressor-operator DNA complex

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Determinants of repressor/operator recognition from the structure of the trp operator binding site.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Heterogeneity in molecular recognition by restriction endonucleases: osmotic and hydrostatic pressure effects on BamHI, Pvu II, and EcoRV specificity

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Water release associated with specific binding of gal repressor

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Nucleotide sequence and expression of Escherichia coli trpR, the structural gene for the trp aporepressor

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Purification and characterization of trp aporepressor

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Interaction of the Operator of the Tryptophan Operon with Repressor

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

The stabilization of proteins by osmolytes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

The three-dimensional structure of trp repressor.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Mutational studies with the trp repressor of Escherichia coli support the helix-turn-helix model of repressor recognition of operator DNA.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

On the specificity of DNA-protein interactions

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Crystal structure of trp repressor/operator complex at atomic resolution

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

DNA specificity determinants of Escherichia coli tryptophan repressor binding

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Analysis of binding in macromolecular complexes: a generalized numerical approach

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

How does trp repressor bind to its operator?

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

The DNA target of the trp repressor

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Protein solvation in allosteric regulation: a water effect on hemoglobin

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Numerical analysis of binding data: advantages, practical aspects, and implications

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Role of protein--protein interactions in the regulation of transcription by trp repressor investigated by fluorescence spectroscopy

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Probing the physical basis for trp repressor-operator recognition

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Dependence of trp repressor-operator affinity, stoichiometry, and apparent cooperativity on DNA sequence and size.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Hydrostatic pressure reverses osmotic pressure effects on the specificity of EcoRI-DNA interactions

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

Structure and regulation of aroH, the structural gene for the tryptophan-repressible 3-deoxy-d-arabino-heptulosonic acid-7-phosphate synthetase of Escherichia coli

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144343

A nontraditional role for water in the cytochrome c oxidase reaction

26 November 2018

1 reference

12 December 2020

Measured change in protein solvation with substrate binding and turnover

1 reference

12 December 2020

The role of water in protein-DNA interactions

1 reference

12 December 2020

Hydrostatic and osmotic pressure as tools to study macromolecular recognition

1 reference

12 December 2020

In vivo and in vitro studies of TrpR-DNA interactions

1 reference

12 December 2020

Chemical potential measurements of deoxyhemoglobin S polymerization. Determination of the phase diagram of an assembling protein

1 reference

12 December 2020

Role of macromolecular hydration in the binding of the Escherichia coli cyclic AMP receptor to DNA

1 reference

12 December 2020

Identifiers

DOI

10.1110/PS.8.6.1276

1 reference

13 August 2017

1 reference

13 August 2017

PubMed publication ID

10386877

1 reference