A guide to statistical analysis in microbial ecology: a community-focused, living review of multivariate data analyses (Q30860214)

27 June 2017

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title

A guide to statistical analysis in microbial ecology: a community-focused, living review of multivariate data analyses (English)

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27 June 2017

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multivariate statistics

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2

Alban Ramette

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Pier Luigi Buttigieg

object named as

Pier Luigi Buttigieg

series ordinal

1

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publication date

5 November 2014

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FEMS Microbiology Ecology

27 June 2017

8

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based on heuristic

inferred from page(s)

published in

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27 June 2017

90

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27 June 2017

543-550

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27 June 2017

3

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PubMed ID

25314312

maintained by WikiProject

27 June 2017

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Biodiversity of benthic microbial communities in bioturbated coastal sediments is controlled by geochemical microniches

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

The energy-diversity relationship of complex bacterial communities in Arctic deep-sea sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Time- and sediment depth-related variations in bacterial diversity and community structure in subtidal sands

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

QIIME allows analysis of high-throughput community sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Pseudoreplication conventions are testable hypotheses

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6941.12437

Comment to Oksanen (2001): reconciling Oksanen (2001) and Hurlbert (1984)

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Disconnect of microbial structure and function: enzyme activities and bacterial communities in nascent stream corridors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Multivariate Cutoff Level Analysis (MultiCoLA) of large community data sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Resistance and resilience of the forest soil microbiome to logging-associated compaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

The ancient black art and transdisciplinary extent of pseudoreplication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Genetic markers in the playground of multivariate analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

A holistic approach to marine eco-systems biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

21 January 2018

An ancient black art.

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Megx.net: integrated database resource for marine ecological genomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Experimental and analytical tools for studying the human microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

ANALYZING OR EXPLAINING BETA DIVERSITY? COMMENT

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Ecologically meaningful transformations for ordination of species data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Scientific method: statistical errors

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6941.12437

Variation partitioning of species data matrices: estimation and comparison of fractions

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6941.12437

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6941.12437

The role of ecological theory in microbial ecology.

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6941.12437

Multivariate analyses in microbial ecology

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6941.12437

Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Pseudoreplication is a pseudoproblem

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Multivariate analyses in soil microbial ecology: a new paradigm

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6941.12437

Analyzing or explaining beta diversity? Understanding the targets of different methods of analysis

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6941.12437

Regularized sandwich estimators for analysis of high-dimensional data using generalized estimating equations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Distance-based multivariate analyses confound location and dispersion effects

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

The Method of Path Coefficients

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Constrained additive ordination.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Random sampling process leads to overestimation of β-diversity of microbial communities

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6941.12437

Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems

21 January 2018

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https://api.crossref.org/works/10.1111%2F1574-6941.12437

Two decades of describing the unseen majority of aquatic microbial diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Spatial modelling: a comprehensive framework for principal coordinate analysis of neighbour matrices (PCNM)

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

All-scale spatial analysis of ecological data by means of principal coordinates of neighbour matrices

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Numerical Ecology with R (Second Edition)

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Spatial and Temporal Variation in a Caribbean Herbivorous Fish Assemblage

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

ANALYZING BETA DIVERSITY: PARTITIONING THE SPATIAL VARIATION OF COMMUNITY COMPOSITION DATA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Species associations: the Kendall coefficient of concordance revisited

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

Studying beta diversity: ecological variation partitioning by multiple regression and canonical analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

DISTANCE-BASED REDUNDANCY ANALYSIS: TESTING MULTISPECIES RESPONSES IN MULTIFACTORIAL ECOLOGICAL EXPERIMENTS

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

ANALYZING OR EXPLAINING BETA DIVERSITY? COMMENT

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1574-6941.12437

21 January 2018

Identifiers

DOI

10.1111/1574-6941.12437

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27 June 2017

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PubMed ID

25314312