Barrier-to-autointegration factor proteome reveals chromatin-regulatory partners (Q30873820)

19 August 2017

Barrier-to-autointegration factor proteome reveals chromatin-regulatory partners (English)

1 reference

19 August 2017

Rocío Montes de Oca

1

1 reference

19 August 2017

Christopher J Shoemaker

2

1 reference

19 August 2017

Marjan Gucek

3

1 reference

19 August 2017

Robert N Cole

4

1 reference

19 August 2017

Katherine L Wilson

5

1 reference

19 August 2017

language of work or name

English

0 references

publication date

16 September 2009

1 reference

19 August 2017

1 reference

19 August 2017

4

1 reference

19 August 2017

e7050

1 reference

19 August 2017

9

1 reference

Creative Commons Attribution 4.0 International

19 August 2017

start time

16 September 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Live cell imaging and electron microscopy reveal dynamic processes of BAF-directed nuclear envelope assembly

21 June 2018

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Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

21 June 2018

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21 June 2018

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The highly conserved nuclear lamin Ig-fold binds to PCNA: its role in DNA replication

21 June 2018

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The LEM domain proteins emerin and LAP2alpha are dispensable for human immunodeficiency virus type 1 and murine leukemia virus infections.

21 June 2018

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The lentiviral integrase binding protein LEDGF/p75 and HIV-1 replication

21 June 2018

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The ankyrin repeats of G9a and GLP histone methyltransferases are mono- and dimethyllysine binding modules

21 June 2018

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Brm transactivates the telomerase reverse transcriptase (TERT) gene and modulates the splicing patterns of its transcripts in concert with p54(nrb).

21 June 2018

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Poxviral B1 kinase overcomes barrier to autointegration factor, a host defense against virus replication

21 June 2018

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Barrier to autointegration factor blocks premature cell fusion and maintains adult muscle integrity in C. elegans

21 June 2018

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An emerin "proteome": purification of distinct emerin-containing complexes from HeLa cells suggests molecular basis for diverse roles including gene regulation, mRNA splicing, signaling, mechanosensing, and nuclear architecture.

21 June 2018

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LEM-Domain proteins: new insights into lamin-interacting proteins

21 June 2018

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p53 regulates its own activator: transcriptional co-activator PC4, a new p53-responsive gene

21 June 2018

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Nuclear localization of barrier-to-autointegration factor is correlated with progression of S phase in human cells

21 June 2018

1 reference

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PTIP associates with MLL3- and MLL4-containing histone H3 lysine 4 methyltransferase complex

21 June 2018

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Gene silencing at the nuclear periphery

21 June 2018

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Nucleoplasmic lamins and their interaction partners, LAP2alpha, Rb, and BAF, in transcriptional regulation.

21 June 2018

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The nuclear lamina. Both a structural framework and a platform for genome organization

21 June 2018

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"Laminopathies": a wide spectrum of human diseases

21 June 2018

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Chromatin challenges during DNA replication and repair

21 June 2018

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Barrier-to-autointegration factor--a BAFfling little protein

21 June 2018

1 reference

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Human laminopathies: nuclei gone genetically awry

21 June 2018

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Human progeroid syndromes, aging and cancer: new genetic and epigenetic insights into old questions

21 June 2018

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Wild-type levels of human immunodeficiency virus type 1 infectivity in the absence of cellular emerin protein

21 June 2018

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Transcriptional coactivator PC4, a chromatin-associated protein, induces chromatin condensation

21 June 2018

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Targeting early apoptotic genes in batch and fed-batch CHO cell cultures

21 June 2018

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alphaII-Spectrin interacts with five groups of functionally important proteins in the nucleus

21 June 2018

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"Cullin 4 makes its mark on chromatin".

21 June 2018

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Nuclear lamins: laminopathies and their role in premature ageing.

21 June 2018

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Expression of disease-causing lamin A mutants impairs the formation of DNA repair foci

21 June 2018

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de FACTo nucleosome dynamics

21 June 2018

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Mutant nuclear lamin A leads to progressive alterations of epigenetic control in premature aging

21 June 2018

1 reference

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Histone H3 and H4 ubiquitylation by the CUL4-DDB-ROC1 ubiquitin ligase facilitates cellular response to DNA damage

21 June 2018

1 reference

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Lamin A-dependent nuclear defects in human aging

21 June 2018

1 reference

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Chaperone-mediated assembly of centromeric chromatin in vitro

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Loss of Acinus inhibits oligonucleosomal DNA fragmentation but not chromatin condensation during apoptosis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Barrier-to-autointegration factor phosphorylation on Ser-4 regulates emerin binding to lamin A in vitro and emerin localization in vivo

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Laminopathies: multisystem dystrophy syndromes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Binding of barrier to autointegration factor (BAF) to histone H3 and selected linker histones including H1.1.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Structural basis for DNA bridging by barrier-to-autointegration factor

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Poly(ADP-ribosyl)ation by PARP-1: 'PAR-laying' NAD+ into a nuclear signal

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

The UV-damaged DNA binding protein mediates efficient targeting of the nucleotide excision repair complex to UV-induced photo lesions.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Reversal of the cellular phenotype in the premature aging disease Hutchinson-Gilford progeria syndrome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Barrier-to-autointegration factor is required to segregate and enclose chromosomes within the nuclear envelope and assemble the nuclear lamina

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

LAP2alpha and BAF transiently localize to telomeres and specific regions on chromatin during nuclear assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

BAF: roles in chromatin, nuclear structure and retrovirus integration

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

General transcriptional coactivator PC4 activates p53 function

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Barrier-to-autointegration factor BAF binds p55 Gag and matrix and is a host component of human immunodeficiency virus type 1 virions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

A statistical model for identifying proteins by tandem mass spectrometry

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Barrier-to-autointegration factor plays crucial roles in cell cycle progression and nuclear organization in Drosophila.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

MAN1 and emerin have overlapping function(s) essential for chromosome segregation and cell division in Caenorhabditis elegans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

MDC1 is required for the intra-S-phase DNA damage checkpoint

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Nonerythroid alphaII spectrin is required for recruitment of FANCA and XPF to nuclear foci induced by DNA interstrand cross-links

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Transcriptional repressor germ cell-less (GCL) and barrier to autointegration factor (BAF) compete for binding to emerin in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Barrier to autointegration factor interacts with the cone-rod homeobox and represses its transactivation function

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Barrier-to-autointegration factor: major roles in chromatin decondensation and nuclear assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

BAF is required for emerin assembly into the reforming nuclear envelope

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Gain-of-function of poly(ADP-ribose) polymerase-1 upon cleavage by apoptotic proteases: implications for apoptosis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Specificity of the HP1 chromo domain for the methylated N-terminus of histone H3.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Set domain-containing protein, G9a, is a novel lysine-preferring mammalian histone methyltransferase with hyperactivity and specific selectivity to lysines 9 and 27 of histone H3

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

LAP2 binds to BAF.DNA complexes: requirement for the LEM domain and modulation by variable regions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Both the structure and DNA binding function of the barrier-to-autointegration factor contribute to reconstitution of HIV type 1 integration in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Barrier-to-autointegration factor (BAF) bridges DNA in a discrete, higher-order nucleoprotein complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

CAF-1 and the inheritance of chromatin states: at the crossroads of DNA replication and repair

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Poly(ADP-ribosyl)ation reactions in the regulation of nuclear functions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Analysis of the NuRD subunits reveals a histone deacetylase core complex and a connection with DNA methylation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Characterization of DNA recognition by the human UV-damaged DNA-binding protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Roles of LAP2 proteins in nuclear assembly and DNA replication: truncated LAP2beta proteins alter lamina assembly, envelope formation, nuclear size, and DNA replication efficiency in Xenopus laevis extracts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

The tail domain of lamin Dm0 binds histones H2A and H2B

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

The dermatomyositis-specific autoantigen Mi2 is a component of a complex containing histone deacetylase and nucleosome remodeling activities

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Solution structure of the cellular factor BAF responsible for protecting retroviral DNA from autointegration

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Histone macroH2A1 is concentrated in the inactive X chromosome of female mammals

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

A previously unidentified host protein protects retroviral DNA from autointegration

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Cloning and characterization of RECQL, a potential human homologue of the Escherichia coli DNA helicase RecQ

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2739719

Requiem: a novel zinc finger gene essential for apoptosis in myeloid cells

21 June 2018

1 reference

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Dual retinoblastoma-binding proteins with properties related to a negative regulator of ras in yeast

21 June 2018

1 reference

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Dynamic interaction between BAF and emerin revealed by FRAP, FLIP, and FRET analyses in living HeLa cells.

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0007050

The inner-nuclear-envelope protein emerin regulates HIV-1 infectivity

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0007050

NAD+-dependent modulation of chromatin structure and transcription by nucleosome binding properties of PARP-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0007050

Poly(ADP-ribose) polymerase-1: association with nuclear lamins in rodent liver cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0007050

PARP-1 ensures regulation of replication fork progression by homologous recombination on damaged DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0007050

The DNA binding and catalytic domains of poly(ADP-ribose) polymerase 1 cooperate in the regulation of chromatin structure and transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0007050

New Histone Incorporation Marks Sites of UV Repair in Human Cells

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19759913

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Human transcriptional coactivator PC4 stimulates DNA end joining and activates DSB repair activity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19759913

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DNA damage binding protein component DDB1 participates in nucleotide excision repair through DDB2 DNA-binding and cullin 4A ubiquitin ligase activity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19759913

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0007050

1 reference

19 August 2017

0 references

1 reference

19 August 2017

1 reference