Wishbone identifies bifurcating developmental trajectories from single-cell data (Q31089177)

17 August 2017

Wishbone identifies bifurcating developmental trajectories from single-cell data (English)

1 reference

17 August 2017

0 references

10

Dana Pe'er

1 reference

17 August 2017

Shlomit Reich-Zeliger

3

object named as

Shlomit Reich-Zeliger

1 reference

17 August 2017

1

Manu Setty

1 reference

17 August 2017

6

Pooja Kathail

1 reference

17 August 2017

2

Michelle D Tadmor

1 reference

17 August 2017

Omer Angel

4

1 reference

17 August 2017

Tomer Meir Salame

5

1 reference

17 August 2017

Kristy Choi

7

1 reference

17 August 2017

Sean Bendall

8

1 reference

17 August 2017

Nir Friedman

9

1 reference

17 August 2017

2 May 2016

1 reference

17 August 2017

1 reference

17 August 2017

34

1 reference

17 August 2017

6

1 reference

17 August 2017

637-645

1 reference

Transcriptional Heterogeneity and Lineage Commitment in Myeloid Progenitors

17 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Single-Cell RNA-Seq with Waterfall Reveals Molecular Cascades underlying Adult Neurogenesis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Single-cell messenger RNA sequencing reveals rare intestinal cell types

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Decoding the regulatory network of early blood development from single-cell gene expression measurements.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Computational and analytical challenges in single-cell transcriptomics

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Regulation of CD4 and CD8 coreceptor expression and CD4 versus CD8 lineage decisions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Bifurcation analysis of single-cell gene expression data reveals epigenetic landscape

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Developmental gene networks: a triathlon on the course to T cell identity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

The transcriptional landscape of αβ T cell differentiation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Mechanisms of T cell development and transformation.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Signal integration and crosstalk during thymocyte migration and emigration

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

GATA factor switching during erythroid differentiation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

mRNA-Seq whole-transcriptome analysis of a single cell

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Lineage fate and intense debate: myths, models and mechanisms of CD4- versus CD8-lineage choice

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

The Immunological Genome Project: networks of gene expression in immune cells.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Distinct functions for the transcription factors GATA-3 and ThPOK during intrathymic differentiation of CD4(+) T cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Transcription factors in myeloid development: balancing differentiation with transformation.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Geometric diffusions as a tool for harmonic analysis and structure definition of data: diffusion maps.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

affy--analysis of Affymetrix GeneChip data at the probe level

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Trajectories of cell-cycle progression from fixed cell populations.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Diffusion maps for high-dimensional single-cell analysis of differentiation data.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

Revised map of the human progenitor hierarchy shows the origin of macrophages and dendritic cells in early lymphoid development.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4900897

CD69 cell surface expression identifies developing thymocytes which audition for T cell antigen receptor-mediated positive selection

25 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27136076

12 December 2020

inferred from PubMed ID database lookup

Myeloperoxidase: a specific marker for myeloid cells in paraffin sections

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27136076

12 December 2020

inferred from PubMed ID database lookup

Reprogramming adult hematopoietic cells

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNBT.3569

7 January 2021

inferred from DOI database lookup

An introduction to modern genetics

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNBT.3569

7 January 2021

inferred from DOI database lookup

A tutorial on spectral clustering

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNBT.3569

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/NBT.3569

1 reference

Dimensions Publication ID

17 August 2017

0 references

1 reference

17 August 2017

1 reference