"Upstream Analysis": An Integrated Promoter-Pathway Analysis Approach to Causal Interpretation of Microarray Data (Q31126994)

18 August 2017

"Upstream Analysis": An Integrated Promoter-Pathway Analysis Approach to Causal Interpretation of Microarray Data (English)

1 reference

18 August 2017

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27600225%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Edgar Wingender

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27600225%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

author name string

Jeannette Koschmann

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27600225%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Philip Stegmaier

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27600225%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Alexander E Kel

4

1 reference

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31 May 2020

publication date

21 May 2015

1 reference

Microarrays (Basel, Switzerland)

18 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27600225%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

volume

4

1 reference

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31 May 2020

issue

2

1 reference

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31 May 2020

page(s)

270-286

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27600225%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

31 May 2020

copyright license

start time

21 May 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

limma

object named as

Limma

2 references

22 June 2022

https://europepmc.org/article/PMC/4996392

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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TAK1 regulates hepatic cell survival and carcinogenesis

14 July 2018

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Causal analysis approaches in Ingenuity Pathway Analysis

14 July 2018

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Naphthalene Mothballs: Emerging and Recurring Issues and their Relevance to Environmental Health

14 July 2018

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14 July 2018

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14 July 2018

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Expression of protein tyrosine kinase 6 (PTK6) in nonsmall cell lung cancer and their clinical and prognostic significance

14 July 2018

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Coexpression and coregulation analysis of time-series gene expression data in estrogen-induced breast cancer cell

14 July 2018

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Overexpression of ubiquitin-specific protease 22 predicts poor survival in patients with early-stage non-small cell lung cancer

14 July 2018

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14 July 2018

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BioGPS and MyGene.info: organizing online, gene-centric information

14 July 2018

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Suppression of Tak1 promotes prostate tumorigenesis

14 July 2018

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Consistency test of the cell cycle: roles for p53 and EGR1.

14 July 2018

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KEGG for integration and interpretation of large-scale molecular data sets

14 July 2018

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The tightly controlled deubiquitination activity of the human SAGA complex differentially modifies distinct gene regulatory elements

14 July 2018

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Modulation of pancreatic cancer chemoresistance by inhibition of TAK1

14 July 2018

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Advanced computational biology methods identify molecular switches for malignancy in an EGF mouse model of liver cancer

14 July 2018

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Differential genomic targeting of the transcription factor TAL1 in alternate haematopoietic lineages

14 July 2018

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Application of transcriptional benchmark dose values in quantitative cancer and noncancer risk assessment

14 July 2018

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Disruption of TAK1 in hepatocytes causes hepatic injury, inflammation, fibrosis, and carcinogenesis

14 July 2018

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Integrated biochemical and computational approach identifies BCL6 direct target genes controlling multiple pathways in normal germinal center B cells.

14 July 2018

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Use of short-term transcriptional profiles to assess the long-term cancer-related safety of environmental and industrial chemicals

14 July 2018

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Building a knowledge base for systems pathology.

14 July 2018

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The TRANSFAC project as an example of framework technology that supports the analysis of genomic regulation.

14 July 2018

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The putative cancer stem cell marker USP22 is a subunit of the human SAGA complex required for activated transcription and cell-cycle progression

14 July 2018

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A TFTC/STAGA module mediates histone H2A and H2B deubiquitination, coactivates nuclear receptors, and counteracts heterochromatin silencing

14 July 2018

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Available data on naphthalene exposures: strengths and limitations.

14 July 2018

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Beyond microarrays: find key transcription factors controlling signal transduction pathways

14 July 2018

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14 July 2018

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Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

14 July 2018

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Molecular mechanisms of caspase regulation during apoptosis

14 July 2018

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14 July 2018

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TAK1-TAB1 fusion protein: a novel constitutively active mitogen-activated protein kinase kinase kinase that stimulates AP-1 and NF-kappaB signaling pathways

14 July 2018

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Proteases for cell suicide: functions and regulation of caspases

14 July 2018

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Association of naphthalene with acute hemolytic anemia

14 July 2018

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Expanding the TRANSFAC database towards an expert system of regulatory molecular mechanisms

14 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4996392

The Ced-3/interleukin 1beta converting enzyme-like homolog Mch6 and the lamin-cleaving enzyme Mch2alpha are substrates for the apoptotic mediator CPP32

14 July 2018

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Calculating confidence intervals for relative risks (odds ratios) and standardised ratios and rates

14 July 2018

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Transcriptional profiling of IKK2/NF-kappa B- and p38 MAP kinase-dependent gene expression in TNF-alpha-stimulated primary human endothelial cells

14 July 2018

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Self-activation of Caspase-6 in vitro and in vivo: Caspase-6 activation does not induce cell death in HEK293T cells.

21 January 2018

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Downregulated expression of PTK6 is correlated with poor survival in esophageal squamous cell carcinoma.

21 January 2018

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Prognostic significance of USP22 as an oncogene in papillary thyroid carcinoma

21 January 2018

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Increased expression of USP22 is associated with disease progression and patient prognosis of salivary duct carcinoma

21 January 2018

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21 January 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27600225%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27600225%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

PubMed publication ID

27600225

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27600225%20AND%20SRC:MED&resulttype=core&format=json