How optimized is the translational machinery in Escherichia coli, Salmonella typhimurium and Saccharomyces cerevisiae? (Q32064330)

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How Optimized Is the Translational Machinery in Escherichia coli, Salmonella typhimurium and Saccharomyces cerevisiae?

Language	Label	Description	Also known as
English	How optimized is the translational machinery in Escherichia coli, Salmonella typhimurium and Saccharomyces cerevisiae?	scientific article	How Optimized Is the Translational Machinery in Escherichia coli, Salmonella typhimurium and Saccharomyces cerevisiae?

Statements

scholarly article

2 references

Europe PubMed Central

PubMed publication ID

6 July 2017

10.1093/genetics/149.1.37

https://api.crossref.org/v1/works/https://doi.org/10.1093/genetics/149.1.37

15 December 2022

How optimized is the translational machinery in Escherichia coli, Salmonella typhimurium and Saccharomyces cerevisiae? (English)

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

How Optimized Is the Translational Machinery in Escherichia coli, Salmonella typhimurium and Saccharomyces cerevisiae? (English)

1 reference

10.1093/genetics/149.1.37

https://api.crossref.org/v1/works/https://doi.org/10.1093/genetics/149.1.37

15 December 2022

Saccharomyces cerevisiae

1 reference

based on heuristic

inferred from title

Salmonella Typhimurium

object named as

Salmonella typhimurium

1 reference

based on heuristic

inferred from title

Escherichia coli

1 reference

based on heuristic

inferred from title

author name string

Xia X

1

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

Xuhua Xia

1

1 reference

10.1093/genetics/149.1.37

https://api.crossref.org/v1/works/https://doi.org/10.1093/genetics/149.1.37

15 December 2022

language of work or name

0 references

publication date

1 May 1998

2 references

Europe PubMed Central

PubMed publication ID

6 July 2017

10.1093/genetics/149.1.37

https://api.crossref.org/v1/works/https://doi.org/10.1093/genetics/149.1.37

15 December 2022

number of pages

8

1 reference

based on heuristic

inferred from page(s)

2 references

Europe PubMed Central

PubMed publication ID

6 July 2017

10.1093/genetics/149.1.37

https://api.crossref.org/v1/works/https://doi.org/10.1093/genetics/149.1.37

15 December 2022

149

2 references

Europe PubMed Central

PubMed publication ID

6 July 2017

10.1093/genetics/149.1.37

https://api.crossref.org/v1/works/https://doi.org/10.1093/genetics/149.1.37

15 December 2022

1

2 references

Europe PubMed Central

PubMed publication ID

6 July 2017

10.1093/genetics/149.1.37

https://api.crossref.org/v1/works/https://doi.org/10.1093/genetics/149.1.37

15 December 2022

37-44

2 references

Europe PubMed Central

PubMed publication ID

6 July 2017

10.1093/genetics/149.1.37

https://api.crossref.org/v1/works/https://doi.org/10.1093/genetics/149.1.37

15 December 2022

Maximizing transcription efficiency causes codon usage bias

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Codon usage bias and base composition of nuclear genes in Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Synonymous codon usage in Drosophila melanogaster: natural selection and translational accuracy.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Selection intensity for codon bias

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Codon selection in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Codon usage in bacteria: correlation with gene expressivity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Escherichia coli ribosomes translate in vivo with variable rate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Codon usage can affect efficiency of translation of genes inEscherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Translation is a non-uniform process. Effect of tRNA availability on the rate of elongation of nascent polypeptide chains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Codon usage and tRNA content in unicellular and multicellular organisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Codon usage patterns in Escherichia coli, Bacillus subtilis, Saccharomyces cerevisiae, Schizosaccharomyces pombe, Drosophila melanogaster and Homo sapiens; a review of the considerable within-species diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

An evolutionary perspective on synonymous codon usage in unicellular organisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Design, synthesis and expression of a human interleukin-2 gene incorporating the codon usage bias found in highly expressed Escherichia coli genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Codon-defined ribosomal pausing in Escherichia coli detected by using the pyrE attenuator to probe the coupling between transcription and translation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Codon usage and gene expression level in Dictyostelium discoideum: highly expressed genes do 'prefer' optimal codons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Is translation inhibited by noncognate ternary complexes?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Translation rate modification by preferential codon usage: intragenic position effects.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Coevolution of codon usage and transfer RNA abundance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

The selection-mutation-drift theory of synonymous codon usage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460137

21 June 2018

Metabolic rate and directional nucleotide substitution in animal mitochondrial DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/9584084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting tran

1 reference

https://pubmed.ncbi.nlm.nih.gov/9584084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Codon usage and intragenic position

1 reference

https://pubmed.ncbi.nlm.nih.gov/9584084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Codon usage determines translation rate in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/9584084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/GENETICS/149.1.37

1 reference

10.1093/genetics/149.1.37

https://api.crossref.org/v1/works/https://doi.org/10.1093/genetics/149.1.37

15 December 2022

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

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