Retrotranspositions in orthologous regions of closely related grass species (Q33254232)

24 July 2017

title

Retrotranspositions in orthologous regions of closely related grass species (English)

1 reference

24 July 2017

Joachim Messing

3

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author name string

Chunguang Du

series ordinal

1

1 reference

24 July 2017

Zuzana Swigonová

series ordinal

2

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24 July 2017

publication date

16 August 2006

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24 July 2017

published in

BMC Evolutionary Biology

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24 July 2017

volume

6

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24 July 2017

page(s)

62

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Deletion of Peg10, an imprinted gene acquired from a retrotransposon, causes early embryonic lethality

24 July 2017

cites work

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Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize

21 June 2018

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Gene movement by Helitron transposons contributes to the haplotype variability of maize

21 June 2018

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The significance of responses of the genome to challenge

21 June 2018

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Evolution of DNA sequence nonhomologies among maize inbreds

21 June 2018

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Finishing the euchromatic sequence of the human genome

21 June 2018

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Structure and evolution of the r/b chromosomal regions in rice, maize and sorghum

21 June 2018

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Gene loss and movement in the maize genome

21 June 2018

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Close split of sorghum and maize genome progenitors

21 June 2018

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Sequence composition and genome organization of maize.

21 June 2018

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Rapid recent growth and divergence of rice nuclear genomes

21 June 2018

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Evolutionary history of Oryza sativa LTR retrotransposons: a preliminary survey of the rice genome sequences

21 June 2018

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Mobile elements: drivers of genome evolution

21 June 2018

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Gene expression of a gene family in maize based on noncollinear haplotypes

21 June 2018

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Plant LTR-retrotransposons and MITEs: control of transposition and impact on the evolution of plant genes and genomes

21 June 2018

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Duplicated fie genes in maize: expression pattern and imprinting suggest distinct functions.

21 June 2018

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Origin of a substantial fraction of human regulatory sequences from transposable elements

21 June 2018

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Genome size reduction through illegitimate recombination counteracts genome expansion in Arabidopsis

21 June 2018

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Transposable elements and the evolution of eukaryotic complexity.

21 June 2018

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MEGA2: molecular evolutionary genetics analysis software

21 June 2018

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Envelope-class retrovirus-like elements are widespread, transcribed and spliced, and insertionally polymorphic in plants

21 June 2018

1 reference

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Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome

21 June 2018

1 reference

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Contribution of the Tos17 retrotransposon to rice functional genomics

21 June 2018

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A contiguous 66-kb barley DNA sequence provides evidence for reversible genome expansion.

21 June 2018

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21 June 2018

Plant retrotransposons

1 reference

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Colinearity and its exceptions in orthologous adh regions of maize and sorghum

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Identification and characterization of novel retrotransposons of the gypsy type in rice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

The paleontology of intergene retrotransposons of maize

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Amplicons of maize zein genes are conserved within genic but expanded and constricted in intergenic regions.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

21 June 2018

1 reference

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Nested retrotransposons in the intergenic regions of the maize genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Retrotransposons of rice involved in mutations induced by tissue culture

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Pack-MULE transposable elements mediate gene evolution in plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Composition and structure of the centromeric region of rice chromosome 8.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Retrotransposon-gene associations are widespread among D. melanogaster populations.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

LTR_STRUC: a novel search and identification program for LTR retrotransposons

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Comparative sequence analysis of the sorghum Rph region and the maize Rp1 resistance gene complex

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Structural analysis of the maize rp1 complex reveals numerous sites and unexpected mechanisms of local rearrangement.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Analysis of a contiguous 211 kb sequence in diploid wheat (Triticum monococcum L.) reveals multiple mechanisms of genome evolution.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Development of sequence characterized DNA markers linked to a dominant verticillium wilt resistance gene in tomato

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1560396

Evolutionary History of the Grasses

31 October 2018

1 reference

12 December 2020

Retrotransposon BARE-1 and Its Role in Genome Evolution in the Genus Hordeum

1 reference

12 December 2020

Evidence for the contribution of LTR retrotransposons to C. elegans gene evolution

1 reference

12 December 2020

Evaluating the performance of a successive-approximations approach to parameter optimization in maximum-likelihood phylogeny estimation

1 reference

12 December 2020

Transposable elements are found in a large number of human protein-coding genes

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2148-6-62

1 reference

Dimensions Publication ID

24 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2148-6-62

9 September 2019

1 reference

24 July 2017

1 reference