ConiferEST: an integrated bioinformatics system for data reprocessing and mining of conifer expressed sequence tags (ESTs) (Q33286096)

25 July 2017

title

ConiferEST: an integrated bioinformatics system for data reprocessing and mining of conifer expressed sequence tags (ESTs) (English)

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25 July 2017

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Chun Liang

1

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25 July 2017

Gang Wang

2

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25 July 2017

Lin Liu

3

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25 July 2017

Guoli Ji

4

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25 July 2017

Lin Fang

5

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25 July 2017

Yuansheng Liu

6

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25 July 2017

Kikia Carter

7

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25 July 2017

Jason S Webb

8

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25 July 2017

Jeffrey F D Dean

9

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25 July 2017

language of work or name

English

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publication date

29 May 2007

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25 July 2017

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25 July 2017

volume

8

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25 July 2017

page(s)

134

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WebTraceMiner: a web service for processing and mining EST sequence trace files.

25 July 2017

cites work

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14 July 2018

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Robust analysis of 5'-transcript ends (5'-RATE): a novel technique for transcriptome analysis and genome annotation

14 July 2018

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Expressed sequence tags from loblolly pine embryos reveal similarities with angiosperm embryogenesis

14 July 2018

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MAGIC-SPP: a database-driven DNA sequence processing package with associated management tools

14 July 2018

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Evaluating and improving cDNA sequence quality with cQC.

14 July 2018

1 reference

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Water stress-responsive genes in loblolly pine (Pinus taeda) roots identified by analyses of expressed sequence tag libraries

14 July 2018

1 reference

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InterProScan: protein domains identifier

14 July 2018

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Alternative polyadenylation of cyclooxygenase-2.

14 July 2018

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Large-scale statistical analysis of secondary xylem ESTs in pine.

14 July 2018

1 reference

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Nontemplated nucleotide addition prior to polyadenylation: a comparison of Arabidopsis cDNA and genomic sequences

14 July 2018

1 reference

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Fugu ESTs: new resources for transcription analysis and genome annotation.

14 July 2018

1 reference

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Flowering time: a pathway that begins at the 3' end.

14 July 2018

1 reference

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Expressed sequence tags: alternative or complement to whole genome sequences?

14 July 2018

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Detection and analysis of spliced chimeric mRNAs in sequence databanks

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1894976

A novel algorithm for computational identification of contaminated EST libraries

14 July 2018

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InterProScan--an integration platform for the signature-recognition methods in InterPro

14 July 2018

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Analysis of expressed sequence tags indicates 35,000 human genes

14 July 2018

1 reference

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Gene ontology: tool for the unification of biology

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1894976

mRNA stability in eukaryotes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1894976

An improved method for construction of directionally cloned cDNA libraries from microdissected cells

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1894976

A physical map of 30,000 human genes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1894976

Alternative gene form discovery and candidate gene selection from gene indexing projects

14 July 2018

1 reference

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Base-calling of automated sequencer traces using phred. I. Accuracy assessment

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1894976

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1894976

Generation and analysis of 280,000 human expressed sequence tags

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1894976

Sequence identification of 2,375 human brain genes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1894976

Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.).

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1894976

Gene index analysis of the human genome estimates approximately 120,000 genes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1894976

31 October 2018

Identifiers

DOI

10.1186/1471-2164-8-134

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Dimensions Publication ID

25 July 2017

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25 July 2017

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