Leveraging hierarchical population structure in discrete association studies (Q33289961)

25 July 2017

Leveraging hierarchical population structure in discrete association studies (English)

1 reference

25 July 2017

1 reference

3

Simon Mallal

1 reference

25 July 2017

Jonathan Carlson

1

1 reference

25 July 2017

Carl Kadie

series ordinal

2

1 reference

25 July 2017

David Heckerman

series ordinal

4

1 reference

25 July 2017

language of work or name

English

0 references

publication date

4 July 2007

1 reference

25 July 2017

1 reference

25 July 2017

2

1 reference

25 July 2017

7

1 reference

25 July 2017

e591

1 reference

Creative Commons Attribution 4.0 International

25 July 2017

start time

4 July 2007

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Principal components analysis corrects for stratification in genome-wide association studies

1 reference

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A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

21 June 2018

1 reference

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Logistic regression protects against population structure in genetic association studies

21 June 2018

1 reference

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Genome-wide association mapping in Arabidopsis identifies previously known flowering time and pathogen resistance genes

21 June 2018

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Confounding from cryptic relatedness in case-control association studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Networks of coevolving sites in structural and functional domains of serpin proteins.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Genome-wide association studies for common diseases and complex traits

21 June 2018

1 reference

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The effects of human population structure on large genetic association studies

21 June 2018

1 reference

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A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 June 2018

1 reference

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Evidence for allelic association on chromosome 3q25-27 in families with autism spectrum disorders originating from a subisolate of Finland

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Statistical significance for genomewide studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Evolutionarily conserved networks of residues mediate allosteric communication in proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Genomic control, a new approach to genetic-based association studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

The extent of linkage disequilibrium in Arabidopsis thaliana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Plant pathogens and integrated defence responses to infection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Genomic control for association studies

21 June 2018

1 reference

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Antigen processing by the proteasome

21 June 2018

1 reference

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Accounting for unmeasured population substructure in case-control studies of genetic association using a novel latent-class model

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Analysis of covariation in an SH3 domain sequence alignment: applications in tertiary contact prediction and the design of compensating hydrophobic core substitutions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Searching for genetic determinants in the new millennium

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Association mapping in structured populations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Separation of phylogenetic and functional associations in biological sequences by using the parametric bootstrap

21 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

21 June 2018

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Evolutionarily conserved pathways of energetic connectivity in protein families

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Coevolving protein residues: maximum likelihood identification and relationship to structure.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Covariation of mutations in the V3 loop of human immunodeficiency virus type 1 envelope protein: an information theoretic analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

How frequent are correlated changes in families of protein sequences?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Compensating changes in protein multiple sequence alignments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Genetic dissection of complex traits

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Evolutionary trees from DNA sequences: A maximum likelihood approach

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Estimation of effects of single genes on quantitative traits

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Genome-wide strategies for detecting multiple loci that influence complex diseases.

21 June 2018

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Dwarf8 polymorphisms associate with variation in flowering time

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000591

Influence of conservation on calculations of amino acid covariance in multiple sequence alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000591

Solution structure of the human immunodeficiency virus type 1 p6 protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000591

Effectiveness of correlation analysis in identifying protein residues undergoing correlated evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000591

Dominant influence of HLA-B in mediating the potential co-evolution of HIV and HLA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000591

Phylogenies and the Comparative Method

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000591

Genome-wide association: a promising start to a long race

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000591

Demonstrating stratification in a European American population

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000591

Founder Effects in the Assessment of HIV Polymorphisms and HLA Allele Associations

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

An Icelandic example of the impact of population structure on association studies

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1899226

Evidence of HIV-1 adaptation to HLA-restricted immune responses at a population level

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17611623

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Modeling residue usage in aligned protein sequences via maximum likelihood

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17611623

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Detection and reduction of evolutionary noise in correlated mutation analysis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17611623

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0000591

1 reference

25 July 2017

0 references

1 reference

25 July 2017

1 reference