Global analysis of aberrant pre-mRNA splicing in glioblastoma using exon expression arrays (Q33333974)

25 July 2017

Global analysis of aberrant pre-mRNA splicing in glioblastoma using exon expression arrays (English)

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25 July 2017

1 reference

Hannah C Cheung

1

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author name string

Keith A Baggerly

2

1 reference

25 July 2017

Spiridon Tsavachidis

3

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25 July 2017

Linda L Bachinski

4

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25 July 2017

Valerie L Neubauer

5

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25 July 2017

Tamara J Nixon

6

1 reference

25 July 2017

Kenneth D Aldape

7

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25 July 2017

Gilbert J Cote

8

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25 July 2017

Ralf Krahe

9

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25 July 2017

language of work or name

English

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publication date

12 May 2008

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25 July 2017

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25 July 2017

9

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25 July 2017

216

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https://scigraph.springernature.com/pub.10.1186/1471-2164-9-216

25 July 2017

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cites work

The gene encoding the splicing factor SF2/ASF is a proto-oncogene

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Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.

21 June 2018

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Alternative splicing: new insights from global analyses

21 June 2018

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The connection between splicing and cancer.

21 June 2018

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Two-dimensional transcriptome profiling: identification of messenger RNA isoform signatures in prostate cancer from archived paraffin-embedded cancer specimens

21 June 2018

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Profiling alternatively spliced mRNA isoforms for prostate cancer classification

21 June 2018

1 reference

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Fox-2 splicing factor binds to a conserved intron motif to promote inclusion of protein 4.1R alternative exon 16.

21 June 2018

1 reference

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Genetic analysis of the cytoplasmic dynein subunit families

21 June 2018

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Involvement of the mouse Prp19 gene in neuronal/astroglial cell fate decisions

21 June 2018

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Structural determinants of pharmacological specificity between D(1) and D(2) dopamine receptors

21 June 2018

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New therapeutic frontiers for metabotropic glutamate receptors

21 June 2018

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Differential control of clathrin subunit dynamics measured with EW-FRAP microscopy.

21 June 2018

1 reference

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Regulation of apoptosis by alternative pre-mRNA splicing

21 June 2018

1 reference

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ANOSVA: a statistical method for detecting splice variation from expression data

21 June 2018

1 reference

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Identification of human exons overexpressed in tumors through the use of genome and expressed sequence data

21 June 2018

1 reference

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The splicing regulatory element, UGCAUG, is phylogenetically and spatially conserved in introns that flank tissue-specific alternative exons

21 June 2018

1 reference

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Identification of putative new splicing targets for ETR-3 using sequences identified by systematic evolution of ligands by exponential enrichment

21 June 2018

1 reference

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Aberrant and alternative splicing in cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Variation in alternative splicing across human tissues

21 June 2018

1 reference

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Strengths and weaknesses of EST-based prediction of tissue-specific alternative splicing

21 June 2018

1 reference

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Correction of aberrant FGFR1 alternative RNA splicing through targeting of intronic regulatory elements

21 June 2018

1 reference

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Alternative splicing of the multidrug resistance protein 1/ATP binding cassette transporter subfamily gene in ovarian cancer creates functional splice variants and is associated with increased expression of the splicing factors PTB and SRp20.

21 June 2018

1 reference

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Identification of two novel alternatively spliced Neuropilin-1 isoforms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Identification of alternatively spliced mRNA variants related to cancers by genome-wide ESTs alignment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Human SPF45, a Splicing Factor, Has Limited Expression in Normal Tissues, Is Overexpressed in Many Tumors, and Can Confer a Multidrug-Resistant Phenotype to Cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Discovery of novel splice forms and functional analysis of cancer-specific alternative splicing in human expressed sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Estimating the occurrence of false positives and false negatives in microarray studies by approximating and partitioning the empirical distribution of p-values

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Pre-mRNA splicing and human disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Computational analysis of alternative splicing using EST tissue information

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

In silico screening for tumour-specific expressed sequences in human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Genome-wide detection of alternative splicing in expressed sequences of human genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

An intronic splicing silencer causes skipping of the IIIb exon of fibroblast growth factor receptor 2 through involvement of polypyrimidine tract binding protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Cancer gene discovery using digital differential display.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Identification of a glioblastoma-associated tenascin-C isoform by a high affinity recombinant antibody

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Repression of human fibroblast growth factor 2 by a novel transcription factor

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Expression of the neurofibromatosis 1 (NF1) isoforms in developing and adult rat tissues.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Identification of differentially regulated splice variants and novel exons in glial brain tumors using exon expression arrays.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Polypyrimidine tract binding protein and Notch1 are independently re-expressed in glioma.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Functional domains of the mouse beta3-adrenoceptor associated with differential G protein coupling

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Relative amounts of antagonistic splicing factors, hnRNP A1 and ASF/SF2, change during neoplastic lung growth: implications for pre-mRNA processing

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

CrkI adapter protein modulates cell migration and invasion in glioblastoma

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Computational analysis and experimental validation of tumor-associated alternative RNA splicing in human cancer.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Differential expression of alternatively spliced neural cell adhesion molecule L1 isoforms during oligodendrocyte maturation.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Alternative splicing of pre-mRNA: developmental consequences and mechanisms of regulation.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410136

Splicing factors are differentially expressed in tumors

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18474104

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

World Health Organization classification of tumors

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18474104

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-9-216

1 reference

Dimensions Publication ID

25 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-9-216

9 September 2019

1 reference

25 July 2017

1 reference