RNA-dependent RNA polymerase 6 delays accumulation and precludes meristem invasion of a viroid that replicates in the nucleus (Q33348342)

26 July 2017

title

RNA-dependent RNA polymerase 6 delays accumulation and precludes meristem invasion of a viroid that replicates in the nucleus (English)

1 reference

26 July 2017

1

1 reference

26 July 2017

4

Andreas Gisel

1 reference

26 July 2017

Beatriz Navarro

3

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Ricardo Flores

object named as

Ricardo Flores

series ordinal

5

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author name string

Angel-Emilio Martínez de Alba

series ordinal

2

1 reference

26 July 2017

language of work or name

English

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publication date

16 December 2009

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26 July 2017

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26 July 2017

volume

84

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26 July 2017

issue

5

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26 July 2017

page(s)

2477-2489

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Deep sequencing of viroid-derived small RNAs from grapevine provides new insights on the role of RNA silencing in plant-viroid interaction

26 July 2017

cites work

1 reference

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Deep sequencing of the small RNAs derived from two symptomatic variants of a chloroplastic viroid: implications for their genesis and for pathogenesis

21 June 2018

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Distinct extremely abundant siRNAs associated with cosuppression in petunia

21 June 2018

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The biology of viroid-host interactions

21 June 2018

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Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1

21 June 2018

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21 June 2018

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Direct and indirect roles of viral suppressors of RNA silencing in pathogenesis.

21 June 2018

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Use, tolerance and avoidance of amplified RNA silencing by plants

21 June 2018

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Small RNA metabolism in Arabidopsis

21 June 2018

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Structural and genetic requirements for the biogenesis of tobacco rattle virus-derived small interfering RNAs.

21 June 2018

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The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins.

21 June 2018

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Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation

21 June 2018

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Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide

21 June 2018

1 reference

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RNA silencing movement in plants

21 June 2018

1 reference

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A viroid RNA with a specific structural motif inhibits chloroplast development.

21 June 2018

1 reference

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Processing of nuclear viroids in vivo: an interplay between RNA conformations.

21 June 2018

1 reference

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Suppression of antiviral silencing by cucumber mosaic virus 2b protein in Arabidopsis is associated with drastically reduced accumulation of three classes of viral small interfering RNAs

21 June 2018

1 reference

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Molecular bases of viral RNA targeting by viral small interfering RNA-programmed RISC.

21 June 2018

1 reference

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Viroid: a useful model for studying the basic principles of infection and RNA biology

21 June 2018

1 reference

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RNAi-associated ssRNA-specific ribonucleases in Tombusvirus P19 mutant-infected plants and evidence for a discrete siRNA-containing effector complex

21 June 2018

1 reference

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A structured viroid RNA serves as a substrate for dicer-like cleavage to produce biologically active small RNAs but is resistant to RNA-induced silencing complex-mediated degradation.

21 June 2018

1 reference

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RETRACTED: Secondary siRNAs result from unprimed RNA synthesis and form a distinct class

21 June 2018

1 reference

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Distinct populations of primary and secondary effectors during RNAi in C. elegans

21 June 2018

1 reference

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RNA interference-inducing hairpin RNAs in plants act through the viral defence pathway

21 June 2018

1 reference

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Evidence for a single rolling circle in the replication of potato spindle tuber viroid

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Nomenclature and functions of RNA-directed RNA polymerases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

HEN1 recognizes 21-24 nt small RNA duplexes and deposits a methyl group onto the 2' OH of the 3' terminal nucleotide

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

RDR6 has a broad-spectrum but temperature-dependent antiviral defense role in Nicotiana benthamiana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

A plant RNA virus suppresses RNA silencing through viral RNA replication

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Viroids and viroid-host interactions.

21 June 2018

1 reference

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An RNA-dependent RNA polymerase prevents meristem invasion by potato virus X and is required for the activity but not the production of a systemic silencing signal

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Correlation between structure and pathogenicity of potato spindle tuber viroid (PSTV).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

A natural variant of a host RNA-dependent RNA polymerase is associated with increased susceptibility to viruses by Nicotiana benthamiana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

On the role of RNA silencing in the pathogenicity and evolution of viroids and viral satellites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

A bromodomain-containing protein from tomato specifically binds potato spindle tuber viroid RNA in vitro and in vivo

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Two chloroplastic viroids induce the accumulation of small RNAs associated with posttranscriptional gene silencing.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Induction of a Highly Specific Antiviral State in Transgenic Plants: Implications for Regulation of Gene Expression and Virus Resistance

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

A chloroplast protein binds a viroid RNA in vivo and facilitates its hammerhead-mediated self-cleavage

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Replicating potato spindle tuber viroid RNA is accompanied by short RNA fragments that are characteristic of post-transcriptional gene silencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Role for a bidentate ribonuclease in the initiation step of RNA interference

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Cellular basis of potato spindle tuber viroid systemic movement

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Avsunviroidae family: viroids containing hammerhead ribozymes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Systemic silencing signal(s).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

A species of small antisense RNA in posttranscriptional gene silencing in plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Isolation of an RNA-directed RNA polymerase-specific cDNA clone from tomato

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Precisely full length, circularizable, complementary RNA: an infectious form of potato spindle tuber viroid

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Systemic acquired silencing: transgene-specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Replication of avocado sunblotch viroid: evidence for a symmetric pathway with two rolling circles and hammerhead ribozyme processing.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

A Replication Cycle for Viroids and Other Small Infectious RNA's

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Domains in viroids: evidence of intermolecular RNA rearrangements and their contribution to viroid evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Imaging of viroids in nuclei from tomato leaf tissue by in situ hybridization and confocal laser scanning microscopy.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Basic local alignment search tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Plus and minus RNAs of peach latent mosaic viroid self-cleave in vitro via hammerhead structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Nucleotide sequence and secondary structure of potato spindle tuber viroid

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Structure and structure formation of viroids

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Potato spindle tuber viroid: the simplicity paradox resolved?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Deep-sequencing of plant viral small RNAs reveals effective and widespread targeting of viral genomes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

RNAi-mediated resistance to Potato spindle tuber viroid in transgenic tomato expressing a viroid hairpin RNA construct

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Interplay between viroid-induced pathogenesis and RNA silencing pathways.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Compromised virus-induced gene silencing in RDR6-deficient plants

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Viroid-induced symptoms in Nicotiana benthamiana plants are dependent on RDR6 activity.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Double-stranded RNA interferes in a sequence-specific manner with the infection of representative members of the two viroid families

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Successive accumulation of two size classes of viroid-specific small RNA in potato spindle tuber viroid-infected tomato plants

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Accumulation of viroid-specific small RNAs and increase in nucleolytic activities linked to viroid-caused pathogenesis

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Phloem flow strongly influences the systemic spread of silencing in GFP Nicotiana benthamiana plants

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Hierarchical action and inhibition of plant Dicer-like proteins in antiviral defense.

31 October 2018

1 reference

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The evolution and diversification of Dicers in plants

31 October 2018

1 reference

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Biochemical specialization within Arabidopsis RNA silencing pathways

31 October 2018

1 reference

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Direct role of a viroid RNA motif in mediating directional RNA trafficking across a specific cellular boundary

31 October 2018

1 reference

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RNA silencing as related to viroid induced symptom expression

31 October 2018

1 reference

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Differential subnuclear localization of RNA strands of opposite polarity derived from an autonomously replicating viroid

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Inhibition of cell growth and shoot development by a specific nucleotide sequence in a noncoding viroid RNA.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

A surveillance system regulates selective entry of RNA into the shoot apex.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Potato spindle tuber viroid as inducer of RNA silencing in infected tomato

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Functional analysis of cymbidium ringspot virus genome

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

RNA-directed RNA polymerase from tomato leaves. I. Purification and physical properties

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2820905

Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 pathway in Arabidopsis reveals dependency on miRNA- and tasiRNA-directed targeting

31 October 2018

1 reference

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Replication of Potato spindle tuber viroid in cultured cells of tobacco and Nicotiana benthamiana: the role of specific nucleotides in determining replication levels for host adaptation

31 October 2018

1 reference

12 December 2020

Movement of potato spindle tuber viroid reveals regulatory points of phloem-mediated RNA traffic

1 reference

12 December 2020

Characterization of small RNAs derived from Citrus exocortis viroid (CEVd) in infected tomato plants

1 reference

12 December 2020

Characterization of the siRNAs associated with peach latent mosaic viroid infection

1 reference

12 December 2020

Discovering viroids — a personal perspective

1 reference

12 December 2020

Complexes containing both polarity strands of avocado sunblotch viroid: identification in chloroplasts and characterization

1 reference

12 December 2020

Identifiers

DOI

10.1128/JVI.02336-09

1 reference

26 July 2017

1 reference

26 July 2017

1 reference