Comparative 3'UTR analysis allows identification of regulatory clusters that drive Eph/ephrin expression in cancer cell lines (Q33354173)

26 July 2017

Comparative 3'UTR analysis allows identification of regulatory clusters that drive Eph/ephrin expression in cancer cell lines (English)

1 reference

26 July 2017

6

Martin Vingron

1 reference

26 July 2017

Jennifer Winter

1

1 reference

26 July 2017

Stefan Roepcke

2

1 reference

26 July 2017

Sven Krause

3

1 reference

26 July 2017

Eva-Christina Müller

4

1 reference

26 July 2017

Albrecht Otto

5

1 reference

26 July 2017

Susann Schweiger

7

1 reference

26 July 2017

language of work or name

English

0 references

publication date

23 July 2008

1 reference

26 July 2017

1 reference

26 July 2017

3

1 reference

26 July 2017

e2780

1 reference

26 July 2017

7

1 reference

Creative Commons Attribution 4.0 International

26 July 2017

start time

23 July 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageQuant

object named as

Image Quant

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Heterogeneous ribonucleoprotein m is a splicing regulatory protein that can enhance or silence splicing of alternatively spliced exons

21 June 2018

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Cell-cell signaling via Eph receptors and ephrins

21 June 2018

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Analysis of mRNA translation in cultured hippocampal neurons

21 June 2018

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Identification and mechanistic characterization of low-molecular-weight inhibitors for HuR

21 June 2018

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Transcriptional regulation of vertebrate axon guidance and synapse formation

21 June 2018

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Why cells move messages: the biological functions of mRNA localization

21 June 2018

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Regulation of EphA8 gene expression by TALE homeobox transcription factors during development of the mesencephalon

21 June 2018

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HuR: post-transcriptional paths to malignancy.

21 June 2018

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FBPs are calibrated molecular tools to adjust gene expression

21 June 2018

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Relief of microRNA-mediated translational repression in human cells subjected to stress

21 June 2018

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Comparative genomics and concerted evolution of beta-tubulin paralogs in Leishmania spp.

21 June 2018

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Tethering KSRP, a decay-promoting AU-rich element-binding protein, to mRNAs elicits mRNA decay

21 June 2018

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PSPC1, NONO, and SFPQ are expressed in mouse Sertoli cells and may function as coregulators of androgen receptor-mediated transcription

21 June 2018

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Comparative promoter analysis allows de novo identification of specialized cell junction-associated proteins

21 June 2018

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AU-rich elements and associated factors: are there unifying principles?

21 June 2018

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Transterm--extended search facilities and improved integration with other databases

21 June 2018

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HuR as a negative posttranscriptional modulator in inflammation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Activity-dependent polyadenylation in neurons

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Antiapoptotic function of RNA-binding protein HuR effected through prothymosin alpha

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Ephrin signaling in vivo: look both ways

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

The role of ephrins and Eph receptors in cancer

21 June 2018

1 reference

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mRNA openers and closers: modulating AU-rich element-controlled mRNA stability by a molecular switch in mRNA secondary structure.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

A KH domain RNA binding protein, KSRP, promotes ARE-directed mRNA turnover by recruiting the degradation machinery

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Repelling class discrimination: ephrin-A5 binds to and activates EphB2 receptor signaling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Identification of a target RNA motif for RNA-binding protein HuR.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Surface expression of heterogeneous nuclear RNA binding protein M4 on Kupffer cell relates to its function as a carcinoembryonic antigen receptor

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

ELAV inhibits 3'-end processing to promote neural splicing of ewg pre-mRNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Selective degradation of AU-rich mRNAs promoted by the p37 AUF1 protein isoform

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

The power of the 3' UTR: translational control and development

21 June 2018

1 reference

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Mfold web server for nucleic acid folding and hybridization prediction

21 June 2018

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Multiple roles of ephrins in morphogenesis, neuronal networking, and brain function.

21 June 2018

1 reference

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Facilitation of dendritic mRNA transport by CPEB

21 June 2018

1 reference

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Translational control by the 3'-UTR: the ends specify the means.

21 June 2018

1 reference

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Molecular characterization of MARTA1, a protein interacting with the dendritic targeting element of MAP2 mRNAs

21 June 2018

1 reference

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Eph family functions from an evolutionary perspective

21 June 2018

1 reference

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Ribonomics: identifying mRNA subsets in mRNP complexes using antibodies to RNA-binding proteins and genomic arrays

21 June 2018

1 reference

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Estrogen and Myc negatively regulate expression of the EphA2 tyrosine kinase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Association of the 72/74-kDa proteins, members of the heterogeneous nuclear ribonucleoprotein M group, with the pre-mRNA at early stages of spliceosome assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Untranslated regions of mRNAs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Getting the message across: the intracellular localization of mRNAs in higher eukaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Structure and expression of the scallop Omega-crystallin gene. Evidence for convergent evolution of promoter sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

The neuron-specific RNA-binding protein ELAV regulates neuroglian alternative splicing in neurons and binds directly to its pre-mRNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Translational control by CPEB: a means to the end

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Spatial and temporal control of RNA stability

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Heterogeneous RNA-binding protein M4 is a receptor for carcinoembryonic antigen in Kupffer cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

21 June 2018

HuR and mRNA stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

mRNA localization: message on the move

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Human 100-kDa homologous DNA-pairing protein is the splicing factor PSF and promotes DNA strand invasion

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Probability-based protein identification by searching sequence databases using mass spectrometry data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

CAP3: A DNA sequence assembly program

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

An enhancer element in the EphA2 (Eck) gene sufficient for rhombomere-specific expression is activated by HOXA1 and HOXB1 homeobox proteins.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

A new regulatory protein, KSRP, mediates exon inclusion through an intronic splicing enhancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Purification, characterization, and cDNA cloning of an AU-rich element RNA-binding protein, AUF1

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

A sequence-specific, single-strand binding protein activates the far upstream element of c-myc and defines a new DNA-binding motif

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

A novel set of spliceosome-associated proteins and the essential splicing factor PSF bind stably to pre-mRNA prior to catalytic step II of the splicing reaction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Identification of a sequence-specific single-stranded DNA binding protein that suppresses transcription of the mouse myelin basic protein gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Equipotent mouse ribosomal protein promoters have a similar architecture that includes internal sequence elements

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Receptor tyrosine kinase EphA2 is regulated by p53-family proteins and induces apoptosis

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002780

Axonal protein synthesis provides a mechanism for localized regulation at an intermediate target

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002780

Hu proteins regulate polyadenylation by blocking sites containing U-rich sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002780

AUF1 is expressed in the developing brain, binds to AT-rich double-stranded DNA, and regulates enkephalin gene expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002780

Evidence for inhibition of MyEF-2 binding to MBP promoter by MEF-1/Pur alpha.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002780

Structural and compositional features of untranslated regions of eukaryotic mRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002780

Segmental expression of the EphA4 (Sek-1) receptor tyrosine kinase in the hindbrain is under direct transcriptional control of Krox-20.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2474680

Destruction of quadruplex by proteins, and its biological implications in replication and telomere maintenance

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18648668

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

AUF1 binding affinity to A+U-rich elements correlates with rapid mRNA degradation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18648668

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0002780

1 reference

26 July 2017

0 references

1 reference

26 July 2017

1 reference