Methylome of DNase I sensitive chromatin in Populus trichocarpa shoot apical meristematic cells: a simplified approach revealing characteristics of gene-body DNA methylation in open chromatin state (Q33354916)

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English	Methylome of DNase I sensitive chromatin in Populus trichocarpa shoot apical meristematic cells: a simplified approach revealing characteristics of gene-body DNA methylation in open chromatin state	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

26 July 2017

Methylome of DNase I sensitive chromatin in Populus trichocarpa shoot apical meristematic cells: a simplified approach revealing characteristics of gene-body DNA methylation in open chromatin state (English)

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Europe PubMed Central

PubMed publication ID

26 July 2017

DNA methylation

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Populus trichocarpa

object named as

Populus trichocarpa

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based on heuristic

inferred from title

Patricia Faivre-Rampant

2

object named as

Patricia Faivre-Rampant

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Nathaniel R Street

object named as

Nathaniel Street

4

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author name string

Clément Lafon-Placette

1

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Europe PubMed Central

PubMed publication ID

26 July 2017

Alain Delaunay

3

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Europe PubMed Central

PubMed publication ID

26 July 2017

Franck Brignolas

5

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Europe PubMed Central

PubMed publication ID

26 July 2017

Stéphane Maury

6

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Europe PubMed Central

PubMed publication ID

26 July 2017

language of work or name

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publication date

17 December 2012

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Europe PubMed Central

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26 July 2017

New Phytologist

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26 July 2017

197

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Europe PubMed Central

PubMed publication ID

26 July 2017

2

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Europe PubMed Central

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26 July 2017

416-430

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Europe PubMed Central

PubMed publication ID

26 July 2017

Palaeogenomics of plants: synteny-based modelling of extinct ancestors

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

The methylome: approaches for global DNA methylation profiling

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https://api.crossref.org/works/10.1111%2FNPH.12026

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DNA methylating and demethylating treatments modify phenotype and cell wall differentiation state in sugarbeet cell lines

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https://api.crossref.org/works/10.1111%2FNPH.12026

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Relationship between DNA methylation and histone acetylation levels, cell redox and cell differentiation states in sugarbeet lines.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Relationship between nucleosome positioning and DNA methylation

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

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Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Genome-wide mapping of Arabidopsis thaliana origins of DNA replication and their associated epigenetic marks

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

DNase-chip: a high-resolution method to identify DNase I hypersensitive sites using tiled microarrays

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Identifying gene regulatory elements by genome-wide recovery of DNase hypersensitive sites

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Transcriptomic and proteomic analyses of pericycle cells of the maize primary root

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Conservation and divergence of methylation patterning in plants and animals

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Epigenetic reprogramming in plant and animal development

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https://api.crossref.org/works/10.1111%2FNPH.12026

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Rapid flow cytometric analysis of the cell cycle in intact plant tissues.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

EUKARYOTIC CYTOSINE METHYLTRANSFERASES

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Populus: a model system for plant biology

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Genome-wide profiling of populus small RNAs

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

RPD3-type histone deacetylases in maize embryos.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Human DNA methylomes at base resolution show widespread epigenomic differences

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https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Two new nuclear isolation buffers for plant DNA flow cytometry: a test with 37 species

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

5S rRNA genes expression is not inhibited by DNA methylation in Arabidopsis.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Evolution of genome size and complexity in Pinus

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Epigenetic regulation of repetitive elements is attenuated by prolonged heat stress in Arabidopsis.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

DNA demethylation in the Arabidopsis genome.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Mapping ribosomal RNA transcription activity in the mouse eye.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Clone history shapes Populus drought responses

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

High resolution methylome map of rat indicates role of intragenic DNA methylation in identification of coding region

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

The B73 Maize Genome: Complexity, Diversity, and Dynamics

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

The Populus Genome Integrative Explorer (PopGenIE): a new resource for exploring the Populus genome

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

A simple and efficient procedure for isolating plant chromatin which is suitable for studies of DNase I-sensitive domains and hypersensitive sites

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

A cross-species transcriptomics approach to identify genes involved in leaf development

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https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

DNA methylation landscapes: provocative insights from epigenomics

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https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Repeat elements and the Arabidopsis DNA methylation landscape

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Time course and amplitude of DNA methylation in the shoot apical meristem are critical points for bolting induction in sugar beet and bolting tolerance between genotypes.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Nucleolar dominance and ribosomal RNA gene silencing

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Methylated DNA immunoprecipitation and microarray-based analysis: detection of DNA methylation in breast cancer cell lines

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Three SRA-domain methylcytosine-binding proteins cooperate to maintain global CpG methylation and epigenetic silencing in Arabidopsis.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Genome-wide evolutionary analysis of eukaryotic DNA methylation.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

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High-resolution mapping of open chromatin in the rice genome

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Genome-wide identification of regulatory DNA elements and protein-binding footprints using signatures of open chromatin in Arabidopsis.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

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Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

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21 January 2018

Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription.

1 reference

https://api.crossref.org/works/10.1111%2FNPH.12026

21 January 2018

Identifiers

10.1111/NPH.12026

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

ResearchGate publication ID

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