Integrative bioinformatics analysis of transcriptional regulatory programs in breast cancer cells (Q33372578)

26 July 2017

Integrative bioinformatics analysis of transcriptional regulatory programs in breast cancer cells (English)

1 reference

26 July 2017

1 reference

Andrew D Smith

2

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author name string

Atsushi Niida

1

1 reference

26 July 2017

Seiya Imoto

3

1 reference

26 July 2017

Shuichi Tsutsumi

4

1 reference

26 July 2017

Hiroyuki Aburatani

5

1 reference

26 July 2017

Michael Q Zhang

6

1 reference

26 July 2017

Tetsu Akiyama

7

1 reference

26 July 2017

29 September 2008

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26 July 2017

1 reference

26 July 2017

9

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26 July 2017

404

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Creative Commons Attribution 2.0 Generic

26 July 2017

start time

29 September 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

describes a project that uses

Bayes' theorem

1 reference

18 June 2022

https://europepmc.org/article/PMC/2572072

based on heuristic

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-9-404

0 references

cites work

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Elucidating the altered transcriptional programs in breast cancer using independent component analysis

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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DNA motifs in human and mouse proximal promoters predict tissue-specific expression

21 June 2018

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The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells

21 June 2018

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Gene expression profiling in breast cancer: understanding the molecular basis of histologic grade to improve prognosis

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21 June 2018

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Genome-wide prediction of mammalian enhancers based on analysis of transcription-factor binding affinity

21 June 2018

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A new generation of JASPAR, the open-access repository for transcription factor binding site profiles

21 June 2018

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TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

21 June 2018

1 reference

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Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)

21 June 2018

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Nuclear control of respiratory gene expression in mammalian cells

21 June 2018

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Gene expression profiling spares early breast cancer patients from adjuvant therapy: derived and validated in two population-based cohorts

21 June 2018

1 reference

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An expression signature for p53 status in human breast cancer predicts mutation status, transcriptional effects, and patient survival

21 June 2018

1 reference

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Effects of threshold choice on biological conclusions reached during analysis of gene expression by DNA microarrays

21 June 2018

1 reference

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Mapping of genetic and epigenetic regulatory networks using microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Array comparative genomic hybridization and its applications in cancer

21 June 2018

1 reference

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Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer

21 June 2018

1 reference

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Robustness, scalability, and integration of a wound-response gene expression signature in predicting breast cancer survival

21 June 2018

1 reference

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Interacting models of cooperative gene regulation

21 June 2018

1 reference

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A common set of gene regulatory networks links metabolism and growth inhibition

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

E2Fs link the control of G1/S and G2/M transcription

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Statistical significance for genomewide studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Gene expression profiles of human breast cancer progression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Integrating regulatory motif discovery and genome-wide expression analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

A gene-expression signature as a predictor of survival in breast cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Transcription factors as targets for cancer therapy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Gene expression profiling predicts clinical outcome of breast cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Sibling rivalry in the E2F family

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Regulatory element detection using correlation with expression.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Using Bayesian networks to analyze expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Molecular portraits of human breast tumours

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Pathological prognostic factors in breast cancer. I. The value of histological grade in breast cancer: experience from a large study with long-term follow-up

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

Predicting gene expression from sequence.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2572072

The ETS-domain transcription factor family

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18823535

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-9-404

1 reference

journals/bmcbi/NiidaSITAZA08

26 July 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

26 July 2017

1 reference