Knottin cyclization: impact on structure and dynamics (Q33392477)

26 July 2017

Knottin cyclization: impact on structure and dynamics (English)

1 reference

26 July 2017

Ulf Diederichsen

4

0 references

author name string

Annie Heitz

1

1 reference

26 July 2017

Olga Avrutina

2

1 reference

26 July 2017

Dung Le-Nguyen

3

1 reference

26 July 2017

Jean-François Hernandez

5

1 reference

26 July 2017

Jérôme Gracy

6

1 reference

26 July 2017

Harald Kolmar

7

1 reference

26 July 2017

Laurent Chiche

8

1 reference

26 July 2017

12 December 2008

1 reference

26 July 2017

BMC Structural Biology

1 reference

26 July 2017

8

1 reference

26 July 2017

54

1 reference

https://scigraph.springernature.com/pub.10.1186/1472-6807-8-54

26 July 2017

0 references

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21 June 2018

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21 June 2018

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New binding specificities derived from Min-23, a small cystine-stabilized peptidic scaffold

21 June 2018

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Structures of the agouti signaling protein

21 June 2018

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21 June 2018

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Discovery, structure and biological activities of the cyclotides

21 June 2018

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21 June 2018

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The KNOTTIN website and database: a new information system dedicated to the knottin scaffold.

21 June 2018

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Disulfide mapping of the cyclotide kalata B1. Chemical proof of the cystic cystine knot motif.

21 June 2018

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Linearization of a naturally occurring circular protein maintains structure but eliminates hemolytic activity

21 June 2018

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Twists, knots, and rings in proteins. Structural definition of the cyclotide framework

21 June 2018

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Disulfide folding pathways of cystine knot proteins. Tying the knot within the circular backbone of the cyclotides

21 June 2018

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Design, pharmacology, and NMR structure of a minimized cystine knot with agouti-related protein activity

21 June 2018

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The cyclotides: novel macrocyclic peptides as scaffolds in drug design

21 June 2018

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Circular proteins--no end in sight

21 June 2018

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Solution structure of the squash trypsin inhibitor MCoTI-II. A new family for cyclic knottins

21 June 2018

1 reference

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Circular proteins in plants: solution structure of a novel macrocyclic trypsin inhibitor from Momordica cochinchinensis

21 June 2018

1 reference

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Plant cyclotides: A unique family of cyclic and knotted proteins that defines the cyclic cystine knot structural motif

21 June 2018

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21 June 2018

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Crystal structure of the complex formed between bovine beta-trypsin and MCTI-A, a trypsin inhibitor of squash family, at 1.8-A resolution

21 June 2018

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Chemical synthesis and folding pathways of large cyclic polypeptides: studies of the cystine knot polypeptide kalata B1.

21 June 2018

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High-resolution structures of three new trypsin-squash-inhibitor complexes: a detailed comparison with other trypsins and their complexes

21 June 2018

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Torsion angle dynamics for NMR structure calculation with the new program DYANA

21 June 2018

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21 June 2018

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Squash inhibitor family of serine proteinases

21 June 2018

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21 June 2018

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Refined 1.6 A resolution crystal structure of the complex formed between porcine beta-trypsin and MCTI-A, a trypsin inhibitor of the squash family. Detailed comparison with bovine beta-trypsin and its complex

21 June 2018

1 reference

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Characterization and 2D NMR study of the stable [9-21, 15-27] 2 disulfide intermediate in the folding of the 3 disulfide trypsin inhibitor EETI II.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

'Random coil' 1H chemical shifts obtained as a function of temperature and trifluoroethanol concentration for the peptide series GGXGG.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

A common structural motif incorporating a cystine knot and a triple-stranded beta-sheet in toxic and inhibitory polypeptides

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Chemical shifts as a tool for structure determination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Solid phase synthesis of a trypsin inhibitor isolated from the Cucurbitaceae Ecballium elaterium.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Use of restrained molecular dynamics in water to determine three-dimensional protein structure: prediction of the three-dimensional structure of Ecballium elaterium trypsin inhibitor II

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Molecular recognition between serine proteases and new bioactive microproteins with a knotted structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

The chemical shift index: a fast and simple method for the assignment of protein secondary structure through NMR spectroscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

The structure of a two-disulfide intermediate assists in elucidating the oxidative folding pathway of a cyclic cystine knot protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Chemical and biomimetic total syntheses of natural and engineered MCoTI cyclotides.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Biosynthesis of a fully functional cyclotide inside living bacterial cells.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Knots in rings. The circular knotted protein Momordica cochinchinensis trypsin inhibitor-II folds via a stable two-disulfide intermediate.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Structure of Ecballium elaterium trypsin inhibitor II (EETI-II): a rigid molecular scaffold.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Isolation and characterization of novel cyclotides from Viola hederaceae: solution structure and anti-HIV activity of vhl-1, a leaf-specific expressed cyclotide.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Capped acyclic permutants of the circular protein kalata B1.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Methods for molecular dynamics simulations of protein folding/unfolding in solution.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Thermal, chemical, and enzymatic stability of the cyclotide kalata B1: the importance of the cyclic cystine knot.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Increasing temperature accelerates protein unfolding without changing the pathway of unfolding.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Stabilization of proteins by glycosylation examined by NMR analysis of a fucosylated proteinase inhibitor.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

The foldon universe: a survey of structural similarity and self-recognition of independently folding units 1 1Edited by F. E. Cohen

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659701

Min-21 and min-23, the smallest peptides that fold like a cystine-stabilized beta-sheet motif: design, solution structure, and thermal stability

31 October 2018

1 reference

12 December 2020

Inhibition of platelet aggregation by grafting RGD and KGD sequences on the structural scaffold of small disulfide-rich proteins

1 reference

12 December 2020

Total synthesis of the macrocyclic cysteine knot microprotein MCoTI-II

1 reference

12 December 2020

Squash trypsin inhibitors from Momordica cochinchinensis exhibit an atypical macrocyclic structure

1 reference

12 December 2020

Pseudo-structures for the 20 common amino acids for use in studies of protein conformations by measurements of intramolecular proton-proton distance constraints with nuclear magnetic resonance

1 reference

12 December 2020

1H 2D NMR and distance geometry study of the folding of Ecballium elaterium trypsin inhibitor, a member of the squash inhibitors family

1 reference

12 December 2020

Folding of the squash trypsin inhibitor EETI II. Evidence of native and non-native local structural preferences in a linear analogue

1 reference

12 December 2020

Identifiers

DOI

10.1186/1472-6807-8-54

1 reference

Dimensions Publication ID

26 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1472-6807-8-54

9 September 2019

1 reference

26 July 2017

1 reference