High quality draft sequences for prokaryotic genomes using a mix of new sequencing technologies (Q33393410)

26 July 2017

High quality draft sequences for prokaryotic genomes using a mix of new sequencing technologies (English)

1 reference

26 July 2017

8

Véronique Anthouard

0 references

Julie Poulain

7

Julie Poulain

0 references

Valérie Barbe

3

Valérie Barbe

0 references

Sophie Mangenot

5

Sophie Mangenot

0 references

Odile Rogier

Odile Rogier

4

0 references

Jean-Marc Aury

Jean-Marc Aury

1

0 references

Corinne Cruaud

2

Corinne Cruaud

1 reference

26 July 2017

11

Patrick Wincker

1 reference

26 July 2017

6

Gaelle Samson

1 reference

26 July 2017

10

François Artiguenave

1 reference

26 July 2017

9

Claude Scarpelli

1 reference

PubMed ID

19087275

26 July 2017

language of work or name

English

0 references

publication date

16 December 2008

1 reference

26 July 2017

1 reference

26 July 2017

9

1 reference

26 July 2017

603

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-9-603

26 July 2017

0 references

cites work

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

1 reference

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Next-generation DNA sequencing methods

21 June 2018

1 reference

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The new paradigm of flow cell sequencing.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Rapid genome sequencing with short universal tiling probes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

A complete collection of single-gene deletion mutants of Acinetobacter baylyi ADP1.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Using quality scores and longer reads improves accuracy of Solexa read mapping

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

SOAP: short oligonucleotide alignment program

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Quality scores and SNP detection in sequencing-by-synthesis systems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Paired-end mapping reveals extensive structural variation in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Accuracy and quality of massively parallel DNA pyrosequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Being pathogenic, plastic, and sexual while living with a nearly minimal bacterial genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

454 sequencing put to the test using the complex genome of barley

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Comparative genomics of the lactic acid bacteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome"

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Genome sequencing in microfabricated high-density picolitre reactors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

The Atlas genome assembly system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Whole-genome sequence assembly for mammalian genomes: Arachne 2.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

21 June 2018

The phusion assembler

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Fast algorithms for large-scale genome alignment and comparison

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

A whole-genome assembly of Drosophila

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Base composition skews, replication orientation, and gene orientation in 12 prokaryote genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Pairwise end sequencing: a unified approach to genomic mapping and sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

Whole-genome sequencing and variant discovery in C. elegans.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2625371

31 October 2018

Identifiers

DOI

10.1186/1471-2164-9-603

1 reference

PubMed ID

19087275

Dimensions Publication ID

26 July 2017

0 references

1 reference

26 July 2017

1 reference

PubMed ID

19087275