Human TRIM gene expression in response to interferons (Q33418607)

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23 January 2020

title

Human TRIM gene expression in response to interferons (English)

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23 January 2020

3

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23 January 2020

Pradeep D Uchil

5

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Florence Margottin-Goguet

23 January 2020

6

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23 January 2020

Sébastien Nisole

11

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7

Walther Mothes

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23 January 2020

author name string

Laetitia Carthagena

1

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23 January 2020

Anna Bergamaschi

2

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23 January 2020

Annie David

4

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23 January 2020

Uriel Hazan

8

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23 January 2020

Catherine Transy

9

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23 January 2020

Gianfranco Pancino

10

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23 January 2020

language of work or name

English

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publication date

17 March 2009

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23 January 2020

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23 January 2020

volume

4

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23 January 2020

page(s)

e4894

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issue

3

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Creative Commons Attribution 4.0 International

23 January 2020

copyright license

start time

17 March 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

TRIM family proteins and their emerging roles in innate immunity

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Implication of TRIM alpha and TRIMCyp in interferon-induced anti-retroviral restriction activities

21 June 2018

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The interferon response inhibits HIV particle production by induction of TRIM22

21 June 2018

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Primer binding site-dependent restriction of murine leukemia virus requires HP1 binding by TRIM28.

21 June 2018

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TRIM E3 ligases interfere with early and late stages of the retroviral life cycle

21 June 2018

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Discordant evolution of the adjacent antiretroviral genes TRIM22 and TRIM5 in mammals

21 June 2018

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Alpha interferon enhances TRIM5alpha-mediated antiviral activities in human and rhesus monkey cells

21 June 2018

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Cutting edge: autoantigen Ro52 is an interferon inducible E3 ligase that ubiquitinates IRF-8 and enhances cytokine expression in macrophages

21 June 2018

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An Atomic Model of the Interferon-β Enhanceosome

21 June 2018

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Crosstalk among Jak-STAT, Toll-like receptor, and ITAM-dependent pathways in macrophage activation

21 June 2018

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MTOC reorientation occurs during FcgammaR-mediated phagocytosis in macrophages

21 June 2018

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TRIM25 RING-finger E3 ubiquitin ligase is essential for RIG-I-mediated antiviral activity

21 June 2018

1 reference

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Identification of the zebrafish IFN receptor: implications for the origin of the vertebrate IFN system.

21 June 2018

1 reference

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PML and PML nuclear bodies: implications in antiviral defence

21 June 2018

1 reference

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Transcriptional profiling of the human monocyte-to-macrophage differentiation and polarization: new molecules and patterns of gene expression

21 June 2018

1 reference

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A ubiquitin E3 ligase Efp is up-regulated by interferons and conjugated with ISG15.

21 June 2018

1 reference

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The engagement of activating FcgammaRs inhibits primate lentivirus replication in human macrophages

21 June 2018

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Stimulated trans-acting factor of 50 kDa (Staf50) inhibits HIV-1 replication in human monocyte-derived macrophages

21 June 2018

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Antiretroviral potential of human tripartite motif-5 and related proteins

21 June 2018

1 reference

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Functional replacement of the RING, B-box 2, and coiled-coil domains of tripartite motif 5alpha (TRIM5alpha) by heterologous TRIM domains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Subclassification of the RBCC/TRIM superfamily reveals a novel motif necessary for microtubule binding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

The interferon-inducible ubiquitin-protein isopeptide ligase (E3) EFP also functions as an ISG15 E3 ligase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

A retrovirus restriction factor TRIM5alpha is transcriptionally regulated by interferons

21 June 2018

1 reference

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The interferon-inducible gene, Ifi204, is transcriptionally activated in response to M-CSF, and its expression favors macrophage differentiation in myeloid progenitor cells

21 June 2018

1 reference

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TRIM family proteins: retroviral restriction and antiviral defence

21 June 2018

1 reference

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Inhibition of IFN-alpha signaling by a PKC- and protein tyrosine phosphatase SHP-2-dependent pathway

21 June 2018

1 reference

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Innate STAT1-dependent genomic response of neurons to the antiviral cytokine alpha interferon

21 June 2018

1 reference

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Biological activity of interleukins-28 and -29: comparison with type I interferons

21 June 2018

1 reference

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IFN-alpha regulates TLR-dependent gene expression of IFN-alpha, IFN-beta, IL-28, and IL-29.

21 June 2018

1 reference

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Positive selection of primate TRIM5alpha identifies a critical species-specific retroviral restriction domain

21 June 2018

1 reference

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TRIM5alpha mediates the postentry block to N-tropic murine leukemia viruses in human cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Trim5alpha protein restricts both HIV-1 and murine leukemia virus

21 June 2018

1 reference

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The human and African green monkey TRIM5alpha genes encode Ref1 and Lv1 retroviral restriction factor activities

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Retrovirus resistance factors Ref1 and Lv1 are species-specific variants of TRIM5alpha

21 June 2018

1 reference

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21 June 2018

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The cytoplasmic body component TRIM5alpha restricts HIV-1 infection in Old World monkeys

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Identification of patterns in biological sequences at the ALGGEN server: PROMO and MALGEN.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Fcgamma receptor-mediated suppression of human immunodeficiency virus type 1 replication in primary human macrophages

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Cluster of TRIM genes in the human MHC class I region sharing the B30.2 domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

IFN-lambdas mediate antiviral protection through a distinct class II cytokine receptor complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

TRIM8/GERP RING finger protein interacts with SOCS-1

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

The 52 000 MW Ro/SS-A autoantigen in Sjögren's syndrome/systemic lupus erythematosus (Ro52) is an interferon-gamma inducible tripartite motif protein associated with membrane proximal structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

PROMO: detection of known transcription regulatory elements using species-tailored searches

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

The tripartite motif family identifies cell compartments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

IRF family of transcription factors as regulators of host defense

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Molecular cloning of ring finger protein 21 (RNF21)/interferon-responsive finger protein (ifp1), which possesses two RING-B box-coiled coil domains in tandem.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

The gene for familial Mediterranean fever, MEFV, is expressed in early leukocyte development and is regulated in response to inflammatory mediators.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Identification of genes differentially regulated by interferon alpha, beta, or gamma using oligonucleotide arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

21 June 2018

1 reference

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MatInd and MatInspector: new fast and versatile tools for detection of consensus matches in nucleotide sequence data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Jak-STAT pathways and transcriptional activation in response to IFNs and other extracellular signaling proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Molecular cloning of a new interferon-induced factor that represses human immunodeficiency virus type 1 long terminal repeat expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Macrophage colony-stimulating factor enhances the susceptibility of macrophages to infection by human immunodeficiency virus and reduces the activity of compounds that inhibit virus binding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Global effect of PEG-IFN-alpha and ribavirin on gene expression in PBMC in vitro.

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004894

Type I interferon-dependent and -independent expression of tripartite motif proteins in immune cells.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004894

Immune complexes suppress IFN-gamma signaling by activation of the FcgammaRI pathway.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0004894

Induction of the PML protein by interferons in normal and APL cells.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Transcriptional induction of the PML growth suppressor gene by interferons is mediated through an ISRE and a GAS element.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

The acute promyelocytic leukaemia-associated PML gene is induced by interferon.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2654144

Serial analysis of gene expression in human monocytes and macrophages

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19290053

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0004894

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19290053%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19290053%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

1 reference