Designing genome-wide association studies: sample size, power, imputation, and the choice of genotyping chip (Q33459119)

27 July 2017

title

Designing genome-wide association studies: sample size, power, imputation, and the choice of genotyping chip (English)

1 reference

genome-wide association study

27 July 2017

main subject

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1 reference

4

Jonathan Marchini

1 reference

27 July 2017

3

Peter Donnelly

1 reference

27 July 2017

Chris C A Spencer

1

1 reference

27 July 2017

Zhan Su

series ordinal

2

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27 July 2017

publication date

15 May 2009

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27 July 2017

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27 July 2017

volume

5

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27 July 2017

issue

5

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27 July 2017

page(s)

e1000477

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Creative Commons Attribution 4.0 International

27 July 2017

copyright license

start time

15 May 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Evaluating the effects of imputation on the power, coverage, and cost efficiency of genome-wide SNP platforms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Calibrating the performance of SNP arrays for whole-genome association studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

A HapMap harvest of insights into the genetics of common disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Evaluating cost efficiency of SNP chips in genome-wide association studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

A second generation human haplotype map of over 3.1 million SNPs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Power to detect risk alleles using genome-wide tag SNP panels

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

A new multipoint method for genome-wide association studies by imputation of genotypes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Replicating genotype-phenotype associations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

A haplotype map of the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Efficiency and power in genetic association studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Genome-wide association studies for common diseases and complex traits

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

The future of genetic studies of complex human diseases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Evaluating coverage of genome-wide association studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Evaluating and improving power in whole-genome association studies using fixed marker sets.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Detecting disease associations due to linkage disequilibrium using haplotype tags: a class of tests and the determinants of statistical power

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2688469

Transferability of tag SNPs in genetic association studies in multiple populations

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19492015

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.1000477

1 reference

27 July 2017

1 reference

27 July 2017

1 reference