A comparison of SNPs and microsatellites as linkage mapping markers: lessons from the zebra finch (Taeniopygia guttata). (Q33548492)

28 July 2017

title

A comparison of SNPs and microsatellites as linkage mapping markers: lessons from the zebra finch (Taeniopygia guttata). (English)

1 reference

28 July 2017

0 references

1 reference

Jessica Stapley

2

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Jon Slate

object named as

Jon Slate

6

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Terry Burke

object named as

Terry Burke

5

0 references

Deborah A. Dawson

3

object named as

Deborah A Dawson

1 reference

28 July 2017

Alexander D Ball

1

1 reference

28 July 2017

Tim R Birkhead

4

1 reference

28 July 2017

language of work or name

English

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publication date

1 April 2010

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28 July 2017

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28 July 2017

volume

11

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28 July 2017

page(s)

218

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A high-density SNP-based linkage map of the chicken genome reveals sequence features correlated with recombination rate

28 July 2017

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28 July 2018

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A linkage map of the zebra finch Taeniopygia guttata provides new insights into avian genome evolution

28 July 2018

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Revising how the computer program CERVUS accommodates genotyping error increases success in paternity assignment

28 July 2018

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Simple sequence repeats in zebra finch (Taeniopygia guttata) expressed sequence tags: a new resource for evolutionary genetic studies of passerines

28 July 2018

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Genetic mapping in a natural population of collared flycatchers (Ficedula albicollis): conserved synteny but gene order rearrangements on the avian Z chromosome

28 July 2018

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Search for QTL affecting the shape of the egg laying curve of the Japanese quail

28 July 2018

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Comparison of microsatellites, single-nucleotide polymorphisms (SNPs) and composite markers derived from SNPs in linkage analysis

28 July 2018

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Comparing single-nucleotide polymorphism marker-based and microsatellite marker-based linkage analyses

28 July 2018

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Comparison of single-nucleotide polymorphisms and microsatellite markers for linkage analysis in the COGA and simulated data sets for Genetic Analysis Workshop 14: Presentation Groups 1, 2, and 3.

28 July 2018

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Genotyping errors: causes, consequences and solutions

28 July 2018

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Toward genome-wide SNP genotyping

28 July 2018

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High-throughput SNP genotyping on universal bead arrays

28 July 2018

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Quantitative trait locus mapping in natural populations: progress, caveats and future directions.

28 July 2018

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Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

28 July 2018

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High chromosome conservation detected by comparative chromosome painting in chicken, pigeon and passerine birds

28 July 2018

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How to track and assess genotyping errors in population genetics studies.

28 July 2018

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Comparative mapping and marker-assisted selection in Rosaceae fruit crops

28 July 2018

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Whole-genome scan, in a complex disease, using 11,245 single-nucleotide polymorphisms: comparison with microsatellites

28 July 2018

1 reference

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Genomewide linkage analysis of bipolar disorder by use of a high-density single-nucleotide-polymorphism (SNP) genotyping assay: a comparison with microsatellite marker assays and finding of significant linkage to chromosome 6q22.

28 July 2018

1 reference

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Effects of genotyping errors, missing values and segregation distortion in molecular marker data on the construction of linkage maps

28 July 2018

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Mapping unexplored genomes: a genetic linkage map of the Hawaiian cricket Laupala

28 July 2018

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MapChart: software for the graphical presentation of linkage maps and QTLs

28 July 2018

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A deer (subfamily Cervinae) genetic linkage map and the evolution of ruminant genomes

28 July 2018

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Fifty Seychelles warbler (Acrocephalus sechellensis) microsatellite loci polymorphic in sylviidae species and their cross-species amplification in other passerine birds

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

A consensus linkage map of the chicken genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

Primer3 on the WWW for general users and for biologist programmers

28 July 2018

1 reference

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CAP3: A DNA sequence assembly program

28 July 2018

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True pedigree errors more frequent than apparent errors for single nucleotide polymorphisms.

28 July 2018

1 reference

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A microsatellite map of wheat

28 July 2018

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PedCheck: a program for identification of genotype incompatibilities in linkage analysis

28 July 2018

1 reference

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Statistical confidence for likelihood-based paternity inference in natural populations

28 July 2018

1 reference

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Mutation rate in human microsatellites: influence of the structure and length of the tandem repeat

28 July 2018

1 reference

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A comprehensive genetic map of the human genome based on 5,264 microsatellites

28 July 2018

1 reference

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Assignment of 30 microsatellite loci to the linkage map of Arabidopsis

28 July 2018

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Basic local alignment search tool

28 July 2018

1 reference

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New methods to identify conserved microsatellite loci and develop primer sets of high cross-species utility - as demonstrated for birds

28 July 2018

1 reference

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Robustness of linkage maps in natural populations: a simulation study

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

Gene order and recombination rate in homologous chromosome regions of the chicken and a passerine bird.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

MLH1-focus mapping in birds shows equal recombination between sexes and diversity of crossover patterns.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

A predicted microsatellite map of the passerine genome based on chicken-passerine sequence similarity.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

Linkage mapping reveals sex-dimorphic map distances in a passerine bird.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

Microsatellite genotyping errors: detection approaches, common sources and consequences for paternal exclusion

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

Guidelines for genotyping in genomewide linkage studies: single-nucleotide-polymorphism maps versus microsatellite maps

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

Detection rates for genotyping errors in SNPs using the trio design.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

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31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

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31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

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31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

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31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

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31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

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31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

MAPPING QUANTITATIVE TRAIT LOCI UNDERLYING FITNESS-RELATED TRAITS IN A FREE-LIVING SHEEP POPULATION

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1 reference

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31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2864244

Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20359323

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Noninvasive genetic sampling: look before you leap

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20359323

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-11-218

1 reference

Dimensions Publication ID

28 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-11-218

release_dqwscnycxnhkbmblr3bqkuudpm

9 September 2019

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/dqwscnycxnhkbmblr3bqkuudpm

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

2864244

1 reference

28 July 2017

1 reference