Probing ribosome-nascent chain complexes produced in vivo by NMR spectroscopy (Q33564161)

28 July 2017

Probing ribosome-nascent chain complexes produced in vivo by NMR spectroscopy (English)

1 reference

28 July 2017

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Helene Launay

3

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Shang-Te Danny Hsu

object named as

Shang-Te Danny Hsu

series ordinal

2

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Chris Dobson

series ordinal

4

object named as

Christopher M Dobson

1 reference

28 July 2017

Lisa D Cabrita

1

1 reference

28 July 2017

John Christodoulou

series ordinal

5

1 reference

28 July 2017

language of work or name

English

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publication date

17 December 2009

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Proceedings of the National Academy of Sciences of the United States of America

28 July 2017

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28 July 2017

106

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28 July 2017

52

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28 July 2017

22239-22244

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describes a project that uses

28 July 2017

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Statics of the ribosomal exit tunnel: implications for cotranslational peptide folding, elongation regulation, and antibiotics binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Tertiary interactions within the ribosomal exit tunnel

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Chain dynamics of nascent polypeptides emerging from the ribosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Cotranslational folding promotes beta-helix formation and avoids aggregation in vivo

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Correlating ribosome function with high-resolution structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Consistent blind protein structure generation from NMR chemical shift data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

A structural understanding of the dynamic ribosome machine

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Structure and dynamics of a ribosome-bound nascent chain by NMR spectroscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Translation of non-capped mRNAs in a eukaryotic cell-free system: acceleration of initiation rate in the course of polysome formation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Reprint of "Generation of ribosome nascent chain complexes for structural and functional studies" [J. Struct. Biol. 158 (2007) 463-471].

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Protein structure determination from NMR chemical shifts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Molecular simulations of cotranslational protein folding: fragment stabilities, folding cooperativity, and trapping in the ribosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Ribosome dynamics: insights from atomic structure modeling into cryo-electron microscopy maps

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Protein production by auto-induction in high density shaking cultures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Conformations of co-translational folding intermediates

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Heteronuclear NMR investigations of dynamic regions of intact Escherichia coli ribosomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

RMF inactivates ribosomes by covering the peptidyl transferase centre and entrance of peptide exit tunnel

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Protein folding and misfolding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Slow diffusion of macromolecular assemblies by a new pulsed field gradient NMR method

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Mechanical unfolding of a titin Ig domain: structure of unfolding intermediate revealed by combining AFM, molecular dynamics simulations, NMR and protein engineering

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

The ribosomal exit tunnel functions as a discriminating gate

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Molecular chaperones in the cytosol: from nascent chain to folded protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

A newly synthesized, ribosome-bound polypeptide chain adopts conformations dissimilar from early in vitro refolding intermediates.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Structural basis for dimerization of the Dictyostelium gelation factor (ABP120) rod

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Structural basis of chaperone function and pilus biogenesis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Recombination of protein domains facilitated by co-translational folding in eukaryotes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Many of the immunoglobulin superfamily domains in cell adhesion molecules and surface receptors belong to a new structural set which is close to that containing variable domains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Contribution of cotranslational folding to the rate of formation of native protein structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Folding on the ribosome of Escherichia coli tryptophan synthase beta subunit nascent chains probed with a conformation-dependent monoclonal antibody

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2799734

Nascent membrane and secretory proteins differ in FRET-detected folding far inside the ribosome and in their exposure to ribosomal proteins.

21 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903750106

Three-dimensional structures of translating ribosomes by Cryo-EM.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903750106

Folding zones inside the ribosomal exit tunnel

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903750106

Homogeneous stalled ribosome nascent chain complexes produced in vivo or in vitro.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903750106

Stationary phase protein overproduction is a fundamental capability of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903750106

Conformation and dynamics of ribosomal stalk protein L12 in solution and on the ribosome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903750106

Structure, dynamics and folding of an immunoglobulin domain of the gelation factor (ABP-120) from Dictyostelium discoideum

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903750106

The Geometry of the Ribosomal Polypeptide Exit Tunnel

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903750106

SOFAST-HMQC Experiments for Recording Two-dimensional Deteronuclear Correlation Spectra of Proteins within a Few Seconds

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903750106

Probing Side-Chain Dynamics of a Ribosome-Bound Nascent Chain Using Methyl NMR Spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0903750106

Co-translational folding of an alphavirus capsid protein in the cytosol of living cells

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20018739

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Dynamics of trigger factor interaction with translating ribosomes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20018739

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0903750106

1 reference

28 July 2017

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1 reference

28 July 2017

1 reference