Long-range interactions between three transcriptional enhancers, active Vkappa gene promoters, and a 3' boundary sequence spanning 46 kilobases (Q33724374)

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English	Long-range interactions between three transcriptional enhancers, active Vkappa gene promoters, and a 3' boundary sequence spanning 46 kilobases	scientific article

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scholarly article

1 reference

Europe PubMed Central

28 July 2017

Long-range interactions between three transcriptional enhancers, active Vkappa gene promoters, and a 3' boundary sequence spanning 46 kilobases (English)

1 reference

Europe PubMed Central

28 July 2017

author name string

Zhe Liu

1

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Europe PubMed Central

28 July 2017

William T Garrard

2

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Europe PubMed Central

28 July 2017

language of work or name

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publication date

1 April 2005

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Europe PubMed Central

28 July 2017

Molecular and Cellular Biology

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Europe PubMed Central

28 July 2017

25

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Europe PubMed Central

28 July 2017

8

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Europe PubMed Central

28 July 2017

3220-3231

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Europe PubMed Central

28 July 2017

describes a project that uses

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Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC1069589/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

Global nature of dynamic protein-chromatin interactions in vivo: three-dimensional genome scanning and dynamic interaction networks of chromatin proteins

1 reference

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21 June 2018

Multiple interactions between regulatory regions are required to stabilize an active chromatin hub.

1 reference

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21 June 2018

The spatial organization of the genome in mammalian cells

1 reference

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CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species

1 reference

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A genetic analysis of chromosome territory looping: diverse roles for distal regulatory elements.

1 reference

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21 June 2018

Spatial organization of gene expression: the active chromatin hub.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

The principles of nuclear structure

1 reference

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21 June 2018

A closer look at long-range chromosomal interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Transcription and the territory: the ins and outs of gene positioning

1 reference

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21 June 2018

Considering nuclear compartmentalization in the light of nuclear dynamics

1 reference

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21 June 2018

Looping and interaction between hypersensitive sites in the active beta-globin locus

1 reference

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21 June 2018

Regulation of E2A activities by histone acetyltransferases in B lymphocyte development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Long-range chromatin regulatory interactions in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Setting the boundaries of chromatin domains and nuclear organization

1 reference

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21 June 2018

Human Mcm proteins at a replication origin during the G1 to S phase transition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

OcaB is required for normal transcription and V(D)J recombination of a subset of immunoglobulin kappa genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Chromatin structural analyses of the mouse Igkappa gene locus reveal new hypersensitive sites specifying a transcriptional silencer and enhancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Nuclear organisation and gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

V(D)J recombination: RAG proteins, repair factors, and regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Subnuclear compartmentalization of immunoglobulin loci during lymphocyte development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Order and disorder in the nucleus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

E protein function in lymphocyte development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Capturing chromosome conformation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Nonequivalent nuclear location of immunoglobulin alleles in B lymphocytes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Transcription factor AP-4 is a ligand for immunoglobulin-kappa promoter E-box elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Human erythroid porphobilinogen deaminase exists in 2 splice variants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Matrix attachment region-dependent function of the immunoglobulin mu enhancer involves histone acetylation at a distance without changes in enhancer occupancy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

BSAP can repress enhancer activity by targeting PU.1 function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

A conserved motif present in a class of helix-loop-helix proteins activates transcription by direct recruitment of the SAGA complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

The organization of replication and transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Dynamic repositioning of genes in the nucleus of lymphocytes preparing for cell division

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Developmental regulation of the kappa locus involves both positive and negative sequence elements in the 3' enhancer that affect synergy with the intron enhancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

A targeted kappa immunoglobulin gene containing a deletion of the nuclear matrix association region exhibits spontaneous hyper-recombination in pre-B cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

p300 mediates transcriptional stimulation by the basic helix-loop-helix activators of the insulin gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Association of transcriptionally silent genes with Ikaros complexes at centromeric heterochromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Requirement for NF-kappaB in osteoclast and B-cell development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Interphase chromosomes undergo constrained diffusional motion in living cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Chromatin dynamics in interphase nuclei and its implications for nuclear structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Both E12 and E47 allow commitment to the B cell lineage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

In vivo occupancy of the kappa light chain enhancers in primary pro- and pre-B cells: a model for kappa locus activation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Interaction and functional collaboration of p300/CBP and bHLH proteins in muscle and B-cell differentiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Specific interactions of chromatin with the nuclear envelope: positional determination within the nucleus in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

A developmentally modulated chromatin structure at the mouse immunoglobulin kappa 3' enhancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Yeast artificial chromosome contigs reveal that distal variable-region genes reside at least 3 megabases from the joining regions in the murine immunoglobulin kappa locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Nucleic acid and protein sequences of phosphocholine-binding light chains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Transcription of mouse kappa chain genes: implications for allelic exclusion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Differentiation-dependent chromatin alterations precede and accompany transcription of immunoglobulin light chain genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Structure of the 5' ends of immunoglobulin genes: a novel conserved sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

The role of the kappa enhancer and its binding factor NF-kappa B in the developmental regulation of kappa gene transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Transcription termination and chromatin structure of the active immunoglobulin kappa gene locus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Chromosomal loop anchorage of the kappa immunoglobulin gene occurs next to the enhancer in a region containing topoisomerase II sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Developmentally controlled and tissue-specific expression of unrearranged VH gene segments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

The immunoglobulin kappa locus contains a second, stronger B-cell-specific enhancer which is located downstream of the constant region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Functional characterization of the developmentally controlled immunoglobulin kappa 3' enhancer: regulation by Id, a repressor of helix-loop-helix transcription factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Immunoglobulin kappa gene enhancers synergistically activate gene expression but independently determine chromatin structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

The synthesis and processing of the messenger RNAs specifying heavy and light chain immunoglobulins in MPC-11 cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

21 June 2018

Assembly and analysis of the mouse immunoglobulin kappa gene sequence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

30 October 2018

Interaction between differentially methylated regions partitions the imprinted genes Igf2 and H19 into parent-specific chromatin loops

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

30 October 2018

The beta-globin nuclear compartment in development and erythroid differentiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

30 October 2018

Chromatin motion is constrained by association with nuclear compartments in human cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

30 October 2018

Two kappa immunoglobulin genes are expressed in the myeloma S107.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

30 October 2018

A mutant immunoglobulin light chain is formed by aberrant DNA- and RNA-splicing events.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

30 October 2018

Immunoglobulin gene transcription is activated by downstream sequence elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1069589

30 October 2018

Four-dimensional imaging of chromatin dynamics during the assembly of the interphase nucleus

1 reference

https://pubmed.ncbi.nlm.nih.gov/15798207

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Long-range intrachromosomal interactions in the T helper type 2 cytokine locus

1 reference

https://pubmed.ncbi.nlm.nih.gov/15798207

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA splicing generates a variant light chain from an aberrantly rearranged kappa gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/15798207

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein-binding sites in Ig gene enhancers determine transcriptional activity and inducibility

1 reference

https://pubmed.ncbi.nlm.nih.gov/15798207

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.25.8.3220-3231.2005

1 reference

Europe PubMed Central

28 July 2017

1 reference

Europe PubMed Central

28 July 2017

1 reference

Europe PubMed Central

28 July 2017

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