Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies (Q33741712)

29 July 2017

title

Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies (English)

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29 July 2017

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14

Claudine Médigue

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Michael J. Sadowsky

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ORCID Public Data File 2021

author name string

Masayuki Sugawara

1

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29 July 2017

Brendan Epstein

2

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29 July 2017

Brian D Badgley

3

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29 July 2017

Tatsuya Unno

4

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29 July 2017

Lei Xu

5

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29 July 2017

Jennifer Reese

6

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29 July 2017

Prasad Gyaneshwar

7

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29 July 2017

Roxanne Denny

8

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29 July 2017

Joann Mudge

9

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29 July 2017

Arvind K Bharti

10

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29 July 2017

Andrew D Farmer

11

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29 July 2017

Gregory D May

12

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29 July 2017

Jimmy E Woodward

13

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29 July 2017

David Vallenet

15

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29 July 2017

Aurélie Lajus

16

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29 July 2017

Zoé Rouy

17

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29 July 2017

Betsy Martinez-Vaz

18

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29 July 2017

Peter Tiffin

19

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29 July 2017

Nevin D Young

20

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29 July 2017

Michael J Sadowsky

21

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29 July 2017

publication date

20 February 2013

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29 July 2017

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29 July 2017

volume

14

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29 July 2017

issue

2

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29 July 2017

page(s)

R17

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Population genomics of the facultatively mutualistic bacteria Sinorhizobium meliloti and S. medicae

29 July 2017

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1 reference

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Comparative genomics of rhizobia nodulating soybean suggests extensive recruitment of lineage-specific genes in adaptations

21 June 2018

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Genome sequence of the soybean symbiont Sinorhizobium fredii HH103.

21 June 2018

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Denitrification in Sinorhizobium meliloti.

21 June 2018

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The Medicago genome provides insight into the evolution of rhizobial symbioses

21 June 2018

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Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula

21 June 2018

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Legume-nodulating betaproteobacteria: diversity, host range, and future prospects.

21 June 2018

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Exploring the symbiotic pangenome of the nitrogen-fixing bacterium Sinorhizobium meliloti

21 June 2018

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Population genomics of Sinorhizobium medicae based on low-coverage sequencing of sympatric isolates.

21 June 2018

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Complete genome sequence of the Medicago microsymbiont Ensifer (Sinorhizobium) medicae strain WSM419

21 June 2018

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21 June 2018

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MicroScope: a platform for microbial genome annotation and comparative genomics

21 June 2018

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Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems

21 June 2018

1 reference

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Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology

21 June 2018

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A portal for rhizobial genomes: RhizoGATE integrates a Sinorhizobium meliloti genome annotation update with postgenome data

21 June 2018

1 reference

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Rhizobial secreted proteins as determinants of host specificity in the rhizobium-legume symbiosis

21 June 2018

1 reference

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Regulation and symbiotic significance of nodulation outer proteins secretion in Sinorhizobium fredii HH103.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053727

Genome sequence of the beta-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia

21 June 2018

1 reference

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Genomes of the symbiotic nitrogen-fixing bacteria of legumes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053727

Legumes symbioses: absence of Nod genes in photosynthetic bradyrhizobia.

21 June 2018

1 reference

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The type IV secretion system of Sinorhizobium meliloti strain 1021 is required for conjugation but not for intracellular symbiosis.

21 June 2018

1 reference

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Multilocus sequence typing as an approach for population analysis of Medicago-nodulating rhizobia

21 June 2018

1 reference

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Genetic Diversity in Bradyrhizobium japonicum Serogroup 123 and Its Relation to Genotype-Specific Nodulation of Soybean

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053727

The versatile bacterial type IV secretion systems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053727

AMIGene: Annotation of MIcrobial Genes

21 June 2018

1 reference

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The composite genome of the legume symbiont Sinorhizobium meliloti

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053727

The sulfur-regulated arylsulfatase gene cluster of Pseudomonas aeruginosa, a new member of the cys regulon

21 June 2018

1 reference

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Symbiotic implications of type III protein secretion machinery in Rhizobium

21 June 2018

1 reference

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Sinorhizobium medicae sp. nov., isolated from annual Medicago spp.

21 June 2018

1 reference

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In Rhizobium meliloti, the operon associated with the nod box n5 comprises nodL, noeA and noeB, three host-range genes specifically required for the nodulation of particular Medicago species.

21 June 2018

1 reference

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Lipo-oligosaccharide nodulation factors: a minireview new class of signaling molecules mediating recognition and morphogenesis

21 June 2018

1 reference

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nodZ, a unique host-specific nodulation gene, is involved in the fucosylation of the lipooligosaccharide nodulation signal of Bradyrhizobium japonicum

21 June 2018

1 reference

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An insertional point mutation inactivates NolR repressor in Rhizobium meliloti 1021.

21 June 2018

1 reference

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Cyclic beta-glucans of members of the family Rhizobiaceae

21 June 2018

1 reference

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nodSU, two new nod genes of the broad host range Rhizobium strain NGR234 encode host-specific nodulation of the tropical tree Leucaena leucocephala

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053727

nolO and noeI (HsnIII) of Rhizobium sp. NGR234 are involved in 3-O-carbamoylation and 2-O-methylation of Nod factors.

21 June 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2013-14-2-R17

Functional genomic analysis of global regulator NolR in Sinorhizobium meliloti

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2013-14-2-R17

Symbiosis-induced cascade regulation of the Mesorhizobium loti R7A VirB/D4 type IV secretion system

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2013-14-2-R17

Infection-blocking genes of a symbiotic Rhizobium leguminosarum strain that are involved in temperature-dependent protein secretion

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2013-14-2-R17

A standardized method for analysis of Medicago truncatula phenotypic development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2013-14-2-R17

Expression and Functional Roles ofBradyrhizobium japonicumGenes Involved in the Utilization of Inorganic and Organic Sulfur Compounds in Free-Living and Symbiotic Conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2013-14-2-R17

A novel highly unsaturated fatty acid moiety of lipo-oligosaccharide signals determines host specificity of Rhizobium

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2013-14-2-R17

Intergenomic epistasis and coevolutionary constraint in plants and rhizobia

21 January 2018

1 reference

12 December 2020

Exopolysaccharides of Rhizobium: synthesis, regulation and symbiotic function

1 reference

12 December 2020

Rhizobial adaptation to hosts, a new facet in the legume root-nodule symbiosis

1 reference

12 December 2020

The nir , nor , and nos denitrification genes are dispersed over the Bradyrhizobium japonicum chromosome

1 reference

12 December 2020

Identifiers

DOI

10.1186/GB-2013-14-2-R17

1 reference

Dimensions Publication ID

29 July 2017

1000287401

0 references

Fatcat ID

release_mtuqoduaxvcnvoz7a7txe77ffe

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/mtuqoduaxvcnvoz7a7txe77ffe

24 November 2022

mapped directly with Wikidata item

PMC publication ID

4053727

1 reference

29 July 2017

1 reference