Early life establishment of site-specific microbial communities in the gut (Q33779231)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24637795%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

title

Early life establishment of site-specific microbial communities in the gut (English)

1 reference

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10 March 2020

2

1 reference

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James Christopher Slaughter

10 March 2020

6

1 reference

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10 March 2020

Yi-Wei Tang

12

1 reference

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10 March 2020

13

Seth Bordenstein

1 reference

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10 March 2020

author name string

Joann Romano-Keeler

1

1 reference

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10 March 2020

Chunlin Wang

3

1 reference

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10 March 2020

Robert M Brucker

4

1 reference

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10 March 2020

Christopher Fonnesbeck

5

1 reference

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10 March 2020

Haijing Li

7

1 reference

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10 March 2020

Danielle P Curran

8

1 reference

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10 March 2020

Shufang Meng

9

1 reference

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10 March 2020

Hernan Correa

10

1 reference

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10 March 2020

Harold N Lovvorn

11

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10 March 2020

Alfred L George

14

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10 March 2020

Jörn-Hendrik Weitkamp

15

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10 March 2020

publication date

5 March 2014

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10 March 2020

1 reference

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10 March 2020

volume

5

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10 March 2020

issue

2

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10 March 2020

page(s)

192-201

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STAT6 deficiency ameliorates severity of oxazolone colitis by decreasing expression of claudin-2 and Th2-inducing cytokines

10 March 2020

cites work

1 reference

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Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization

4 July 2018

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A framework for human microbiome research

4 July 2018

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Bacterial biogeography of the human digestive tract

4 July 2018

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Necrotising enterocolitis is characterised by disrupted immune regulation and diminished mucosal regulatory (FOXP3)/effector (CD4, CD8) T cell ratios.

4 July 2018

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The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates

4 July 2018

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Naturally transmitted segmented filamentous bacteria segregate with diabetes protection in nonobese diabetic mice.

4 July 2018

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Bacterial DNA content in the intestinal wall from infants with necrotizing enterocolitis

4 July 2018

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Fecal microbiota in premature infants prior to necrotizing enterocolitis

4 July 2018

1 reference

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High prevalence of aggregative adherent Escherichia coli strains in the mucosa-associated microbiota of patients with inflammatory bowel diseases

4 July 2018

1 reference

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Community analysis of bacteria colonizing intestinal tissue of neonates with necrotizing enterocolitis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

4 July 2018

1 reference

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Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

Search and clustering orders of magnitude faster than BLAST

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

QIIME allows analysis of high-throughput community sequencing data

4 July 2018

1 reference

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Identifying biologically relevant differences between metagenomic communities

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

PyNAST: a flexible tool for aligning sequences to a template alignment

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

Culture-independent identification of gut bacteria correlated with the onset of diabetes in a rat model.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

A core gut microbiome in obese and lean twins

4 July 2018

1 reference

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Evolution of mammals and their gut microbes

4 July 2018

1 reference

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Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes

4 July 2018

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Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

Evaluation of NucliSens easyMAG for automated nucleic acid extraction from various clinical specimens

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

The Crohn's disease-associated adherent-invasive Escherichia coli strain LF82 replicates in mature phagolysosomes within J774 macrophages.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

UniFrac: a new phylogenetic method for comparing microbial communities

4 July 2018

1 reference

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Comprehensive algorithm for quantitative real-time polymerase chain reaction

4 July 2018

1 reference

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An immunomodulatory molecule of symbiotic bacteria directs maturation of the host immune system

4 July 2018

1 reference

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Diversity of the human intestinal microbial flora

4 July 2018

1 reference

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Bacterial contributions to mammalian gut development

4 July 2018

1 reference

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The functions of mucosal T cells in containing the indigenous commensal flora of the intestine

4 July 2018

1 reference

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Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces

4 July 2018

1 reference

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IgA responses in the intestinal mucosa against pathogenic and non-pathogenic microorganisms.

4 July 2018

1 reference

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Hypothesis: inappropriate colonization of the premature intestine can cause neonatal necrotizing enterocolitis.

4 July 2018

1 reference

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Commensal host-bacterial relationships in the gut

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

Comparison of phenotypic and genotypic techniques for identification of unusual aerobic pathogenic gram-negative bacilli

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4063844

Using ecological diversity measures with bacterial communities.

4 July 2018

1 reference

https://api.crossref.org/works/10.4161%2FGMIC.28442

High temporal and inter-individual variation detected in the human ileal microbiota.

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FGMIC.28442

Semi-automated extraction of microbial DNA from feces for qPCR and phylogenetic microarray analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FGMIC.28442

Adaptation of Sorensen's K (1948) for Estimating Unit Affinities in Prairie Vegetation

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FGMIC.28442

A Mathematical Theory of Communication

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FGMIC.28442

21 January 2018

Measurement of Diversity

1 reference

https://api.crossref.org/works/10.4161%2FGMIC.28442

21 January 2018

Identifiers

DOI

10.4161/GMIC.28442

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24637795%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24637795%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24637795%20AND%20SRC:MED&resulttype=core&format=json