Systematic evaluation of genome-wide methylated DNA enrichment using a CpG island array. (Q33787436)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21211017%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

title

Systematic evaluation of genome-wide methylated DNA enrichment using a CpG island array (English)

1 reference

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19 January 2020

1 reference

7

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19 January 2020

author name string

Liu Yang

1

1 reference

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19 January 2020

Kunlin Zhang

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21211017%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Wei Dai

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21211017%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Ximiao He

4

1 reference

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19 January 2020

Qian Zhao

5

1 reference

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19 January 2020

Jing Wang

6

1 reference

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19 January 2020

language of work or name

English

0 references

publication date

6 January 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21211017%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21211017%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

volume

12

1 reference

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19 January 2020

page(s)

10

1 reference

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describes a project that uses

19 January 2020

limma

object named as

limma

2 references

22 June 2022

https://europepmc.org/article/PMC/3023747

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-10

0 references

cites work

Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Advantages of next-generation sequencing versus the microarray in epigenetic research

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Methylation detection oligonucleotide microarray analysis: a high-resolution method for detection of CpG island methylation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Targeted bisulfite sequencing reveals changes in DNA methylation associated with nuclear reprogramming

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Probe signal correction for differential methylation hybridization experiments

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Next-generation DNA sequencing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Genome-scale DNA methylation maps of pluripotent and differentiated cells

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Next-generation DNA sequencing methods

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Highly integrated single-base resolution maps of the epigenome in Arabidopsis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Methyl-DNA immunoprecipitation (MeDIP): hunting down the DNA methylome.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

A comparison of background correction methods for two-colour microarrays

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Sequence analysis and editing for bisulphite genomic sequencing projects

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Array-based profiling of reference-independent methylation status (aPRIMES) identifies frequent promoter methylation and consecutive downregulation of ZIC2 in pediatric medulloblastoma

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

MMASS: an optimized array-based method for assessing CpG island methylation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

A profile of methyl-CpG binding domain protein occupancy of hypermethylated promoter CpG islands of tumor suppressor genes in human cancer

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Evidence for an instructive mechanism of de novo methylation in cancer cells.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Microarray-based DNA methylation profiling: technology and applications

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Large-scale structure of genomic methylation patterns

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Epigenomic changes during leukemia cell differentiation: analysis of histone acetylation and cytosine methylation using CpG island microarrays

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

The history of cancer epigenetics

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Normalization of cDNA microarray data

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

DNA methylation in cancer: too much, but also too little

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Comprehensive analysis of CpG islands in human chromosomes 21 and 22

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

DNA methylation patterns and epigenetic memory

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Initial sequencing and analysis of the human genome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

The Sequence of the Human Genome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Formation of methylation patterns in the mammalian genome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Purification of CpG islands using a methylated DNA binding column

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Hypomethylation distinguishes genes of some human cancers from their normal counterparts

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Differential methylation hybridization: profiling DNA methylation with a high-density CpG island microarray

4 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-10

Methylated DNA immunoprecipitation (MeDIP).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-10

Methylation analysis by DNA immunoprecipitation (MeDIP).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-10

Genistein alters methylation patterns in mice.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Dissecting complex epigenetic alterations in breast cancer using CpG island microarrays.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

The protective effect of estrogen against chemically induced murine colon carcinogenesis is associated with decreased CpG island methylation and increased mRNA and protein expression of the colonic vitamin D receptor.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3023747

Use of CpG island microarrays to identify colorectal tumors with a high degree of concurrent methylation

30 October 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-10

Methylation profiling of CpG islands in human breast cancer cells

21 January 2018

1 reference

12 December 2020

Differential methylation hybridization using CpG island arrays

1 reference

12 December 2020

Methylation microarray analysis of late-stage ovarian carcinomas distinguishes progression-free survival in patients and identifies candidate epigenetic markers

1 reference

12 December 2020

Applications of CpG island microarrays for high-throughput analysis of DNA methylation

1 reference

12 December 2020

CpG island arrays: an application toward deciphering epigenetic signatures of breast cancer

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-12-10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21211017%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

19 January 2020

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-10

9 September 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21211017%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

1 reference