Visualization of individual DNA loops and a map of loop domains in the human dystrophin gene. (Q33832483)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15087487%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

title

Visualization of individual DNA loops and a map of loop domains in the human dystrophin gene (English)

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27 December 2019

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5

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27 December 2019

Andrey A. Bystritskiy

2

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27 December 2019

Dmitry A. Ravcheev

3

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27 December 2019

author name string

Olga V Iarovaia

1

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27 December 2019

Ronald Hancock

4

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27 December 2019

language of work or name

English

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publication date

15 April 2004

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27 December 2019

published in

Nucleic Acids Research

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27 December 2019

volume

32

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27 December 2019

page(s)

2079-2086

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27 December 2019

issue

7

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Spatial organization of gene expression: the active chromatin hub.

27 December 2019

cites work

1 reference

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Topological organization of the MYC/IGK locus in Burkitt's lymphoma cells assessed by nuclear halo preparations

4 July 2018

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Epigenetics: interaction of DNA methylation and chromatin

4 July 2018

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The nuclear matrix and chromosomal DNA loops: is their any correlation between partitioning of the genome into loops and functional domains?

4 July 2018

1 reference

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Re-defining the chromatin loop domain

4 July 2018

1 reference

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Chromosomal DNA loops may constitute basic units of the eukaryotic genome organization and evolution

4 July 2018

1 reference

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Immunofluorescent analysis of the organization of telomeric DNA sequences and their involvement in chromosomal aberrations in hamster cells

4 July 2018

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The chicken lysozyme gene 5' MAR and the Drosophila histone SAR are electroelutable from encapsulated and digested nuclei

4 July 2018

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High resolution multicolor fluorescence in situ hybridization using cyanine and fluorescein dyes: rapid chromosome identification by directly fluorescently labeled alphoid DNA probes

4 July 2018

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Specificity and functional significance of DNA interaction with the nuclear matrix: new approaches to clarify the old questions

4 July 2018

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Mapping of genomic DNA loop organization in a 500-kilobase region of the Drosophila X chromosome by the topoisomerase II-mediated DNA loop excision protocol

4 July 2018

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Generation of ordered phage sublibraries of YAC clones: construction of a 400-kb phage contig in the human dystrophin gene.

4 July 2018

1 reference

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Dynamic changes in the higher-level chromatin organization of specific sequences revealed by in situ hybridization to nuclear halos

4 July 2018

1 reference

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Different topoisomerase II antitumor drugs direct similar specific long-range fragmentation of an amplified c-MYC gene locus in living cells and in high-salt-extracted nuclei.

4 July 2018

1 reference

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A relationship between replicon size and supercoiled loop domains in the eukaryotic genome.

4 July 2018

1 reference

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Organization of DNA replication in Physarum polycephalum. Attachment of origins of replicons and replication forks to the nuclear matrix

4 July 2018

1 reference

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Architecture of metaphase chromosomes and chromosome scaffolds

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=407818

A protein binds to a satellite DNA repeat at three specific sites that would be brought into mutual proximity by DNA folding in the nucleosome.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=407818

Organization of the higher-order chromatin loop: specific DNA attachment sites on nuclear scaffold

4 July 2018

1 reference

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Chromosomal loop anchorage of the kappa immunoglobulin gene occurs next to the enhancer in a region containing topoisomerase II sites

4 July 2018

1 reference

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In situ localization of DNA topoisomerase II, a major polypeptide component of the Drosophila nuclear matrix fraction

4 July 2018

1 reference

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Topoisomerase II is a structural component of mitotic chromosome scaffolds.

4 July 2018

1 reference

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Molecular and phenotypic analysis of patients with deletions within the deletion-rich region of the Duchenne muscular dystrophy (DMD) gene

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=407818

Precise localization of the alpha-globin gene cluster within one of the 20- to 300-kilobase DNA fragments released by cleavage of chicken chromosomal DNA at topoisomerase II sites in vivo: evidence that the fragments are DNA loops or domains

4 July 2018

1 reference

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Reconstruction of the 2.4 Mb human DMD-gene by homologous YAC recombination

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=407818

The structure of histone-depleted metaphase chromosomes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=407818

Mammalian recombination hot spot in a DNA loop anchorage region: a model for the study of common fragile sites.

4 July 2018

1 reference

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Mapping of replication origins and termination sites in the Duchenne muscular dystrophy gene.

29 October 2018

1 reference

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Metaphase chromosome structure: Evidence for a radial loop model

29 October 2018

1 reference

12 December 2020

A deletion hot spot in the Duchenne muscular dystrophy gene

1 reference

12 December 2020

Structural-functional organization of chromosomal DNA domains

1 reference

12 December 2020

A refined restriction map of YAC clones spanning the entire human dystrophin gene

1 reference

12 December 2020

Visualizing the Spatial Relationships between Defined DNA Sequences and the Axial Region of Extracted Metaphase Chromosomes

1 reference

12 December 2020

DNA loop domains in a 1.4-Mb region around the human hprt gene mapped by cleavage mediated by nuclear matrix-associated topoisomerase II

1 reference

12 December 2020

Role of nonhistone proteins in metaphase chromosome structure

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKH532

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15087487%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15087487%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

1 reference