On the origin of species: insights from the ecological genomics of lake whitefish (Q33856837)

29 July 2017

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title

On the origin of species: insights from the ecological genomics of lake whitefish (English)

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29 July 2017

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1

Louis Bernatchez

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29 July 2017

9

Kjartan Ostbye

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29 July 2017

Sébastien Renaut

2

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29 July 2017

Andrew R Whiteley

3

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29 July 2017

Nicolas Derome

4

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29 July 2017

Julie Jeukens

5

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29 July 2017

Lysandre Landry

6

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29 July 2017

Guoqing Lu

7

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29 July 2017

Arne W Nolte

8

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29 July 2017

Sean M Rogers

10

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29 July 2017

Jérôme St-Cyr

11

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29 July 2017

language of work or name

English

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publication date

1 June 2010

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29 July 2017

18

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Philosophical Transactions of the Royal Society B

inferred from page(s)

published in

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29 July 2017

365

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29 July 2017

1547

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29 July 2017

1783-1800

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maintained by WikiProject

29 July 2017

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Quantification of the yeast transcriptome by single-molecule sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Natural selection in action during speciation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Comparative genomic and population genetic analyses indicate highly porous genomes and high levels of gene flow between divergent helianthus species

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Mitochondrial bioenergetics as a major motive force of speciation.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Divergence in gene regulation at young life history stages of whitefish (Coregonus sp.) and the emergence of genomic isolation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Harnessing genomics for evolutionary insights

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Evidence for ecological speciation and its alternative

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Ecological explanations for (incomplete) speciation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Divergence along a steep ecological gradient in lake whitefish (Coregonus sp.).

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Divergent selection and heterogeneous genomic divergence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Genotype-dependent variation of mitochondrial transcriptional profiles in interpopulation hybrids

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

The phenomics and expression quantitative trait locus mapping of brain transcriptomes regulating adaptive divergence in lake whitefish species pairs (Coregonus sp.).

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Natural selection on a major armor gene in threespine stickleback

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Pervasive sex-linked effects on transcription regulation as revealed by expression quantitative trait loci mapping in lake whitefish species pairs (Coregonus sp., Salmonidae)

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Gene expression profiling by massively parallel sequencing.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Which evolutionary processes influence natural genetic variation for phenotypic traits?

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Linking metabolic QTLs with network and cis-eQTLs controlling biosynthetic pathways

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Spatial differentiation for flower color in the desert annual Linanthus parryae: was Wright right?

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Ecological selection against hybrids in natural populations of sympatric threespine sticklebacks

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Genome clashes in hybrids: insights from gene expression

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

SNP discovery via 454 transcriptome sequencing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Parallel evolution of lake whitefish dwarf ecotypes in association with limnological features of their adaptive landscape

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Variable gene expression in eukaryotes: a network perspective

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

The molecular basis of high-altitude adaptation in deer mice

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Combining population genomics and quantitative genetics: finding the genes underlying ecologically important traits.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

The evolutionary significance of cis-regulatory mutations

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Functional genomics of cactus host shifts in Drosophila mojavensis.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Speciation genetics: evolving approaches.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

A conserved supergene locus controls colour pattern diversity in Heliconius butterflies

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

A single amino acid mutation contributes to adaptive beach mouse color pattern

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Uncovering evolutionary patterns of gene expression using microarrays

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Evolutionary history of the European whitefish Coregonus lavaretus (L.) species complex as inferred from mtDNA phylogeography and gill-raker numbers

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Challenges for identifying functionally important genetic variation: the promise of combining complementary research strategies.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

The quantitative genetics of transcription

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Multiplexed discovery of sequence polymorphisms using base-specific cleavage and MALDI-TOF MS

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

The genetic theory of adaptation: a brief history

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Identification of 315 genes essential for early zebrafish development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

How species evolve collectively: implications of gene flow and selection for the spread of advantageous alleles

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Anomalies in the expression profile of interspecific hybrids of Drosophila melanogaster and Drosophila simulans

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Development and application of a salmonid EST database and cDNA microarray: data mining and interspecific hybridization characteristics

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Combining the analyses of introgressive hybridisation and linkage mapping to investigate the genetic architecture of population divergence in the lake whitefish (Coregonus clupeaformis, Mitchill).

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

The role of hybridization in evolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Testing natural selection vs. genetic drift in phenotypic evolution using quantitative trait locus data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Population structure in Daphnia obtusa: quantitative genetic and allozymic variation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Repetitive and Non-Repetitive DNA Sequences and a Speculation on the Origins of Evolutionary Novelty

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Evolution at two levels in humans and chimpanzees

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Identifying adaptive genetic divergence among populations from genome scans.

28 July 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

Covariation of larval gene expression and adult body size in natural populations of Drosophila melanogaster.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

The transcriptomics of ecological convergence between 2 limnetic coregonine fishes (Salmonidae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

Evaluating the role of natural selection in the evolution of gene regulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

Revealing the architecture of gene regulation: the promise of eQTL studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

Candidate genes and adaptive radiation: insights from transcriptional adaptation to the limnetic niche among coregonine fishes (Coregonus spp., Salmonidae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

On the origin and spread of an adaptive allele in deer mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

Contrasting patterns of mitochondrial DNA and microsatellite introgressive hybridization between lineages of lake whitefish (Coregonus clupeaformis); relevance for speciation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

The genetics of quantitative traits: challenges and prospects

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

THE EVOLUTION OF POSTZYGOTIC ISOLATION: ACCUMULATING DOBZHANSKY-MULLER INCOMPATIBILITIES

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

Gene expression divergence and hybrid misexpression between lake whitefish species pairs (Coregonus spp. Salmonidae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

Contributions of genomics to life-history theory

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

The genetic basis of intrinsic and extrinsic post-zygotic reproductive isolation jointly promoting speciation in the lake whitefish species complex (Coregonus clupeaformis).

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

The genetic architecture of ecological speciation and the association with signatures of selection in natural lake whitefish (Coregonus sp. Salmonidae) species pairs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

Adaptive radiation, nonadaptive radiation, ecological speciation and nonecological speciation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

Genomic islands of speciation in Anopheles gambiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

A test of fitness consequences of hybridization in sibling species of Lake Victoria cichlid fish.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

Fish and chips: various methodologies demonstrate utility of a 16,006-gene salmonid microarray

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2009.0274

Mining transcriptome sequences towards identifying adaptive single nucleotide polymorphisms in lake whitefish species pairs (Coregonus spp. Salmonidae).

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

The genetic mosaic suggests a new role for hitchhiking in ecological speciation.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

The transcriptomics of life-history trade-offs in whitefish species pairs (Coregonus sp.).

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Linkage maps of the dwarf and Normal lake whitefish (Coregonus clupeaformis) species complex and their hybrids reveal the genetic architecture of population divergence

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Parallel evolution of ecomorphological traits in the European whitefish Coregonus lavaretus (L.) species complex during postglacial times.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Genome sequencing in microfabricated high-density picolitre reactors

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Multipoint mapping of viability and segregation distorting loci using molecular markers.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

Hybrid zones and the genetic architecture of a barrier to gene flow between two sunflower species

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2871888

The evolution of postzygotic isolation: accumulating Dobzhansky-Muller incompatibilities

29 October 2018

1 reference

12 December 2020

Variation in gene expression within and among natural populations

1 reference

12 December 2020

Genetically based phenotype-environment association for swimming behavior in lake whitefish ecotypes (Coregonus clupeaformis Mitchill)

1 reference

12 December 2020

Generic scan using AFLP markers as a means to assess the role of directional selection in the divergence of sympatric whitefish ecotypes

1 reference

12 December 2020

Integrating QTL mapping and genome scans towards the characterization of candidate loci under parallel selection in the lake whitefish (Coregonus clupeaformis)

1 reference

12 December 2020

Morphological divergence and origin of sympatric populations of European whitefish (Coregonus lavaretus L.) in Lake Femund, Norway

1 reference

12 December 2020

Parallelism in gene transcription among sympatric lake whitefish (Coregonus clupeaformis Mitchill) ecotypes

1 reference

12 December 2020

Systems biology spins off a new model for the study of canalization

1 reference

12 December 2020

1 reference

12 December 2020

ALLOPATRIC ORIGIN OF SYMPATRIC POPULATIONS OF LAKE WHITEFISH (COREGONUS CLUPEAFORMIS) AS REVEALED BY MITOCHONDRIAL-DNA RESTRICTION ANALYSIS.

1 reference

12 December 2020

PHYLOGEOGRAPHIC STRUCTURE IN MITOCHONDRIAL DNA OF THE LAKE WHITEFISH (COREGONUS CLUPEAFORMIS) AND ITS RELATION TO PLEISTOCENE GLACIATIONS.

1 reference

12 December 2020

1 reference

12 December 2020

LABORATORY EXPERIMENTS ON SPECIATION: WHAT HAVE WE LEARNED IN 40 YEARS?

1 reference

12 December 2020

MULTIPLE MODES OF SPECIATION INVOLVED IN THE PARALLEL EVOLUTION OF SYMPATRIC MORPHOTYPES OF LAKE WHITEFISH (COREGONUS CLUPEAFORMIS, SALMONIDAE).

1 reference

12 December 2020

Identifiers

DOI

10.1098/RSTB.2009.0274

1 reference

29 July 2017

1 reference

29 July 2017

1 reference