A model of a MAPK•substrate complex in an active conformation: a computational and experimental approach (Q33873389)

29 July 2017

title

A model of a MAPK•substrate complex in an active conformation: a computational and experimental approach (English)

1 reference

29 July 2017

Sunbae Lee

1

1 reference

29 July 2017

Mangalika Warthaka

2

1 reference

29 July 2017

Chunli Yan

3

1 reference

29 July 2017

Tamer S Kaoud

4

1 reference

29 July 2017

Andrea Piserchio

5

1 reference

29 July 2017

Ranajeet Ghose

6

1 reference

29 July 2017

Pengyu Ren

7

1 reference

29 July 2017

Kevin N Dalby

8

1 reference

29 July 2017

language of work or name

English

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publication date

11 April 2011

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29 July 2017

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29 July 2017

volume

6

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29 July 2017

issue

4

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29 July 2017

page(s)

e18594

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Creative Commons Attribution 4.0 International

29 July 2017

copyright license

start time

11 April 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Phosphorylation of the transcription factor Ets-1 by ERK2: rapid dissociation of ADP and phospho-Ets-1.

1 reference

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Structural Requirements for the Ubiquitin-associated Domain of the mRNA Export Factor Mex67 to Bind Its Specific Targets, the Transcription Elongation THO Complex Component Hpr1 and Nucleoporin FXFG Repeats

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Substrate discrimination among mitogen-activated protein kinases through distinct docking sequence motifs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Comparative protein structure modeling using Modeller

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Unique MAP Kinase binding sites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Expanding the repertoire of an ERK2 recruitment site: cysteine footprinting identifies the D-recruitment site as a mediator of Ets-1 binding.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Differential regulation and properties of MAPKs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Molecular basis of MAPK-activated protein kinase 2:p38 assembly

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Crystal structure of the p38 alpha-MAPKAP kinase 2 heterodimer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

MAP kinase pathways: the first twenty years

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Structural basis of docking interactions between ERK2 and MAP kinase phosphatase 3.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

The role of docking interactions in mediating signaling input, output, and discrimination in the yeast MAPK network

5 July 2018

1 reference

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5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Protein-protein interactions in the regulation of the extracellular signal-regulated kinase

5 July 2018

1 reference

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Regulation of protein kinases; controlling activity through activation segment conformation

5 July 2018

1 reference

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Structural basis for the selective inhibition of JNK1 by the scaffolding protein JIP1 and SP600125.

5 July 2018

1 reference

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Signalling specificity of Ser/Thr protein kinases through docking-site-mediated interactions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Crystal structures of MAP kinase p38 complexed to the docking sites on its nuclear substrate MEF2A and activator MKK3b

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Specificity determinants in MAPK signaling to transcription factors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

An ERK2 docking site in the Pointed domain distinguishes a subset of ETS transcription factors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Docking domains and substrate-specificity determination for MAP kinases

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Multiple docking sites on substrate proteins form a modular system that mediates recognition by ERK MAP kinase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Structure of the Ets-1 pointed domain and mitogen-activated protein kinase phosphorylation site.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Empirical scoring functions: I. The development of a fast empirical scoring function to estimate the binding affinity of ligands in receptor complexes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Activation mechanism of the MAP kinase ERK2 by dual phosphorylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Development and validation of a genetic algorithm for flexible docking

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3073974

Proximity-induced catalysis by the protein kinase ERK2.

5 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018594

Properties and regulation of a transiently assembled ERK2.Ets-1 signaling complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018594

Two Rate-Limiting Steps in the Kinetic Mechanism of the Serine/Threonine Specific Protein Kinase ERK2: A Case of Fast Phosphorylation Followed by Fast Product Release

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018594

Transient protein-protein interactions and a random-ordered kinetic mechanism for the phosphorylation of a transcription factor by extracellular-regulated protein kinase 2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018594

Docking motif interactions in MAP kinases revealed by hydrogen exchange mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018594

Docking sites on substrate proteins direct extracellular signal-regulated kinase to phosphorylate specific residues

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018594

Kinetic advantage of intrinsically disordered proteins in coupled folding-binding process: a critical assessment of the "fly-casting" mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0018594

Selective targeting of MAPKs to the ETS domain transcription factor SAP-1

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21494553

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Docking interactions induce exposure of activation loop in the MAP kinase ERK2

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21494553

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0018594

1 reference

release_qpwmbnk3pbghxe4pi3yihupsce

29 July 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/qpwmbnk3pbghxe4pi3yihupsce

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

3073974

1 reference

29 July 2017

1 reference