Fluorescent labeling of tRNA dihydrouridine residues: Mechanism and distribution (Q33917894)

30 July 2017

title

Fluorescent labeling of tRNA dihydrouridine residues: Mechanism and distribution (English)

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30 July 2017

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ChEBI release 2020-05-28

Jaskiran Kaur

1

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30 July 2017

Monika Raj

series ordinal

2

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30 July 2017

Barry S Cooperman

series ordinal

3

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30 July 2017

language of work or name

English

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publication date

31 May 2011

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30 July 2017

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30 July 2017

volume

17

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30 July 2017

issue

7

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30 July 2017

page(s)

1393-1400

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Single-molecule fluorescence measurements of ribosomal translocation dynamics.

30 July 2017

cites work

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Enhancement of single-molecule fluorescence signals by colloidal silver nanoparticles in studies of protein translation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

DNA mismatch repair (MMR)-dependent 5-fluorouracil cytotoxicity and the potential for new therapeutic targets.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Synthesis and functional activity of tRNAs labeled with fluorescent hydrazides in the D-loop

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Multiple endonucleases improve MALDI-MS signature digestion product detection of bacterial transfer RNAs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Use of DNAzymes for site-specific analysis of ribonucleotide modifications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

The translational fidelity function of IF3 during transition from the 30 S initiation complex to the 70 S initiation complex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

A quantitative kinetic scheme for 70 S translation initiation complex formation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Fluorescent labeling of tRNAs for dynamics experiments

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Kinetically competent intermediates in the translocation step of protein synthesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Identification of two distinct hybrid state intermediates on the ribosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Mass spectrometry-based detection of transfer RNAs by their signature endonuclease digestion products

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

tRNA dynamics on the ribosome during translation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Detection and quantitation of RNA base modifications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Stable isotope labeling for matrix-assisted laser desorption/ionization mass spectrometry and post-source decay analysis of ribonucleic acids

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

RNase T1 mediated base-specific cleavage and MALDI-TOF MS for high-throughput comparative sequence analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Mapping posttranscriptional modifications in 5S ribosomal RNA by MALDI mass spectrometry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the analysis of RNase H cleavage products

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Complete kinetic mechanism of elongation factor Tu-dependent binding of aminoacyl-tRNA to the A site of the E. coli ribosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Photoreduction of uridine and reduction of dihydrouridine with sodium borohydride

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Replacement of wybutine by hydrazines and its effect on the active conformation of yeast tRNAPhe

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Fluorescent Derivatives of Yeast tRNAPhe

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Interaction of 3,4,5,6-tetrahydrouridine with human liver cytidine deaminase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

tRNA selection and kinetic proofreading in translation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Nascent membrane and secretory proteins differ in FRET-detected folding far inside the ribosome and in their exposure to ribosomal proteins.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

An elongation factor G-induced ribosome rearrangement precedes tRNA-mRNA translocation

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138574

Initiation of protein synthesis with fluorophore-Met-tRNA(f) and the involvement of IF-2

29 October 2018

1 reference

12 December 2020

Replacement of Y base, dihydrouracil, and 7-methylguanine in tRNA by artificial odd bases

1 reference

12 December 2020

Functional microfabricated sample targets for matrix-assisted laser desorption/ionization mass spectrometry analysis of ribonucleic acids

1 reference

12 December 2020

Peptide bond formation does not involve acid-base catalysis by ribosomal residues

1 reference

12 December 2020

Coupling of ribosomal L1 stalk and tRNA dynamics during translation elongation

1 reference

12 December 2020

Mass spectrometry of nucleic acids

1 reference

12 December 2020

53 Replacement of odd bases in tRNA by fluorescent dyes

1 reference

12 December 2020

Selective reduction of yeast transfer ribonucleic acid with sodium borohydride

1 reference

12 December 2020

Nucleic acids. IV. The catalytic reduction of pyrimidine nucleosides (human liver deaminase inhibitors)

1 reference

12 December 2020

Identifiers

DOI

10.1261/RNA.2670811

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30 July 2017

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30 July 2017

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