Direct observation of R-loop formation by single RNA-guided Cas9 and Cascade effector complexes. (Q33919648)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24912165%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

title

Direct observation of R-loop formation by single RNA-guided Cas9 and Cascade effector complexes (English)

1 reference

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20 March 2020

0 references

1

1 reference

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20 March 2020

Maria S Tikhomirova

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24912165%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

7

Virginijus Siksnys

1 reference

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20 March 2020

4

Giedrius Gasiunas

1 reference

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20 March 2020

5

Tautvydas Karvelis

1 reference

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20 March 2020

8

Ralf Seidel

1 reference

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20 March 2020

author name string

Tomas Sinkunas

series ordinal

3

1 reference

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20 March 2020

Patrizia Pschera

series ordinal

6

1 reference

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20 March 2020

language of work or name

English

0 references

publication date

27 May 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24912165%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

20 March 2020

published in

1 reference

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20 March 2020

volume

111

1 reference

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20 March 2020

issue

27

1 reference

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20 March 2020

page(s)

9798-9803

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24912165%20AND%20SRC:MED&resulttype=core&format=json

Crystal Structure of Cas9 in Complex with Guide RNA and Target DNA

20 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

DNA interrogation by the CRISPR RNA-guided endonuclease Cas9.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Cas9 as a versatile tool for engineering biology

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Transcription under torsion

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

The helicase-like domains of type III restriction enzymes trigger long-range diffusion along DNA

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

crRNA and tracrRNA guide Cas9-mediated DNA interference in Streptococcus thermophilus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

In vitro reconstitution of Cascade-mediated CRISPR immunity in Streptococcus thermophilus.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Probing the elasticity of DNA on short length scales by modeling supercoiling under tension

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Mechanism of Foreign DNA Selection in a Bacterial Adaptive Immune System

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Structure and Mechanism of the CMR Complex for CRISPR-Mediated Antiviral Immunity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Direct mechanical measurements reveal the material properties of three-dimensional DNA origami

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Structures of the RNA-guided surveillance complex from a bacterial immune system

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Evolution and classification of the CRISPR-Cas systems

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Structural basis for CRISPR RNA-guided DNA recognition by Cascade

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Cas3 is a single-stranded DNA nuclease and ATP-dependent helicase in the CRISPR/Cas immune system

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Torsional sensing of small-molecule binding using magnetic tweezers

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Mechanical and structural properties of YOYO-1 complexed DNA

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Small CRISPR RNAs guide antiviral defense in prokaryotes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Phage response to CRISPR-encoded resistance in Streptococcus thermophilus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4103346

Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1402597111

Initiation of transcription-coupled repair characterized at single-molecule resolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1402597111

Energetics at the DNA supercoiling transition

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1402597111

DNA-DNA interactions in tight supercoils are described by a small effective charge density.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1402597111

Abrupt buckling transition observed during the plectoneme formation of individual DNA molecules.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1402597111

Torque measurements reveal sequence-specific cooperative transitions in supercoiled DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1402597111

Nicking enzyme–based internal labeling of DNA at multiple loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1402597111

Torsional stiffness of single superparamagnetic microspheres in an external magnetic field

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24912165

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Measurement of the torque on a single stretched and twisted DNA using magnetic tweezers

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24912165

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1402597111

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24912165%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

0 references

release_t44kyvnurbg4ppeicwjn36tkhy

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/t44kyvnurbg4ppeicwjn36tkhy

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24912165%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

PubMed publication ID

24912165

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24912165%20AND%20SRC:MED&resulttype=core&format=json