Quantifying the mechanisms for segmental duplications in mammalian genomes by statistical analysis and modeling (Q33932490)

30 July 2017

Quantifying the mechanisms for segmental duplications in mammalian genomes by statistical analysis and modeling (English)

1 reference

30 July 2017

0 references

Yi Zhou

1

1 reference

PubMed ID

15741274

30 July 2017

Bud Mishra

series ordinal

2

1 reference

PubMed ID

15741274

30 July 2017

language of work or name

English

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publication date

1 March 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

1 reference

30 July 2017

102

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30 July 2017

11

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30 July 2017

4051-4056

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Analysis of segmental duplications and genome assembly in the mouse

30 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Recent segmental duplications in the working draft assembly of the brown Norway rat.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Hotspots of mammalian chromosomal evolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Eucaryotic genome evolution through the spontaneous duplication of large chromosomal segments

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Shuffling of genes within low-copy repeats on 22q11 (LCR22) by Alu-mediated recombination events during evolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Fragile site orthologs FHIT/FRA3B and Fhit/Fra14A2: evolutionarily conserved but highly recombinogenic

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

High-resolution mapping of amplifications and deletions in pediatric osteosarcoma by use of CGH analysis of cDNA microarrays

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

An Alu Transposition Model for the Origin and Expansion of Human Segmental Duplications

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Recent segmental and gene duplications in the mouse genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Analysis of primate genomic variation reveals a repeat-driven expansion of the human genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Initial sequencing and comparative analysis of the mouse genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

The role of Alu repeat clusters as mediators of recurrent chromosomal aberrations in tumors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Recent segmental duplications in the human genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Alu repeats and human genomic diversity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Initial sequencing and analysis of the human genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Detecting gene copy number fluctuations in tumor cells by microarray analysis of genomic representations

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Genome-wide analysis of DNA copy-number changes using cDNA microarrays

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Genetic instabilities in human cancers

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Molecular characterization of a common fragile site (FRA7H) on human chromosome 7 by the cloning of a simian virus 40 integration site.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Sites of predicted stress-induced DNA duplex destabilization occur preferentially at regulatory loci

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Predicting DNA duplex stability from the base sequence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Sequence dependence of DNA conformational flexibility.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Trans mobilization of genomic DNA as a mechanism for retrotransposon-mediated exon shuffling.

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407957102

The age of Alu subfamilies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407957102

Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407957102

Enrichment of segmental duplications in regions of breaks of synteny between the human and mouse genomes suggest their involvement in evolutionary rearrangements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0407957102

Role for a region of helically unstable DNA within the Epstein-Barr virus latent cycle origin of DNA replication oriP in origin function

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=554802

Patterns of Segmental Duplication in the Human Genome

29 October 2018

1 reference

12 December 2020

Identification of t(15;17) and a segmental duplication of chromosome 11q23 in a patient with acute myeloblastic leukemia M2

1 reference

12 December 2020

Identification of a 14 kb deletion involving the promoter region of BRCA1 in a breast cancer family

1 reference

12 December 2020

Shotgun sequence assembly and recent segmental duplications within the human genome

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0407957102

1 reference

release_jzdahfpokvgzjihbp5y42hndb4

30 July 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/jzdahfpokvgzjihbp5y42hndb4

24 November 2022

mapped directly with Wikidata item

PMCID

554802

1 reference

30 July 2017

1 reference

PubMed ID

15741274