Precise mapping of RNA tertiary structure via nanometer distance measurements with double electron-electron resonance spectroscopy (Q34013621)

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5 February 2020

title

Precise mapping of RNA tertiary structure via nanometer distance measurements with double electron-electron resonance spectroscopy (English)

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5 February 2020

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2

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5 February 2020

author name string

Nak-Kyoon Kim

series ordinal

1

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5 February 2020

Victoria J DeRose

series ordinal

3

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5 February 2020

language of work or name

English

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publication date

1 July 2010

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Journal of the American Chemical Society

5 February 2020

published in

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5 February 2020

volume

132

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5 February 2020

issue

26

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5 February 2020

page(s)

8882-8884

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Folding of the cocaine aptamer studied by EPR and fluorescence spectroscopies using the bifunctional spectroscopic probe Ç.

5 February 2020

cites work

1 reference

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PELDOR Spectroscopy Distance Fingerprinting of the Octameric Outer-Membrane Protein Wza from Escherichia coli

5 July 2018

1 reference

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Motions of the substrate recognition duplex in a group I intron assessed by site-directed spin labeling

5 July 2018

1 reference

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Site-directed spin labeling studies on nucleic acid structure and dynamics

5 July 2018

1 reference

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Metal ion specificities for folding and cleavage activity in the Schistosoma hammerhead ribozyme

5 July 2018

1 reference

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RNA dynamics: it is about time.

5 July 2018

1 reference

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High-resolution distance mapping in rhodopsin reveals the pattern of helix movement due to activation

5 July 2018

1 reference

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Solution structure of HIV-1 protease flaps probed by comparison of molecular dynamics simulation ensembles and EPR experiments

5 July 2018

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Advances in single-molecule fluorescence methods for molecular biology

5 July 2018

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Hammerhead redux: does the new structure fit the old biochemical data?

5 July 2018

1 reference

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Focus on function: single molecule RNA enzymology.

5 July 2018

1 reference

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Long-range distance determinations in biomacromolecules by EPR spectroscopy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908488

Nanometer distance measurements in RNA using site-directed spin labeling

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908488

Distance measurements on spin-labelled biomacromolecules by pulsed electron paramagnetic resonance

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908488

When to believe what you see.

5 July 2018

1 reference

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Tertiary contacts distant from the active site prime a ribozyme for catalysis

5 July 2018

1 reference

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NMR techniques for very large proteins and rnas in solution

5 July 2018

1 reference

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Separate metal requirements for loop interactions and catalysis in the extended hammerhead ribozyme

5 July 2018

1 reference

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The structure-function dilemma of the hammerhead ribozyme

5 July 2018

1 reference

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Global structure of a DNA three-way junction by solution NMR: towards prediction of 3H fold

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908488

A PELDOR-based nanometer distance ruler for oligonucleotides

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908488

Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908488

Self-cleavage of plus and minus RNAs of a virusoid and a structural model for the active sites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908488

PELDOR spectroscopy reveals preorganization of the neomycin-responsive riboswitch tertiary structure

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908488

Relative orientation of rigid nitroxides by PELDOR: beyond distance measurements in nucleic acids.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908488

Lesion-induced DNA weak structural changes detected by pulsed EPR spectroscopy combined with site-directed spin labelling.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908488

Structure of the tyrosyl biradical in mouse R2 ribonucleotide reductase from high-field PELDOR.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908488

Folding of the natural hammerhead ribozyme is enhanced by interaction of auxiliary elements.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2908488

Site-specific incorporation of nitroxide spin-labels into internal sites of the TAR RNA; structure-dependent dynamics of RNA by EPR spectroscopy.

29 October 2018

1 reference

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Site-specific incorporation of nitroxide spin-labels into 2′-positions of nucleic acids

29 October 2018

1 reference

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Fast Cleavage Kinetics of a Natural Hammerhead Ribozyme

29 October 2018

1 reference

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10 December 2018

Identifiers

DOI

10.1021/JA101317G

1 reference

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5 February 2020

1 reference

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5 February 2020

1 reference