Whole-genome sequencing of individuals from a founder population identifies candidate genes for asthma (Q34035181)

30 July 2017

Whole-genome sequencing of individuals from a founder population identifies candidate genes for asthma (English)

1 reference

30 July 2017

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whole genome sequencing

1 reference

29

1 reference

30 July 2017

Gaixin Du

6

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Arthur Ko

Arthur Ko

13

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Jessica X. Chong

Jessica X Chong

12

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Brian J O'Roak

Brian J O'Roak

14

0 references

Robert F Lemanske

28

Robert F Lemanske

1 reference

30 July 2017

32

Carole Ober

1 reference

30 July 2017

33

Evan E Eichler

1 reference

30 July 2017

3

Maika Malig

1 reference

30 July 2017

17

Choli Lee

1 reference

30 July 2017

1

Catarina D Campbell

1 reference

30 July 2017

30

Mark Abney

1 reference

30 July 2017

15

Niklas Krumm

1 reference

30 July 2017

31

Esteban G Burchard

1 reference

Emerita Brigino-Buenaventura

30 July 2017

21

Emerita Brigino-Buenaventura

1 reference

30 July 2017

8

Celeste Eng

1 reference

30 July 2017

Fereydoun Hormozdiari

4

Fereydoun Hormozdiari

1 reference

30 July 2017

2

Kiana Mohajeri

1 reference

30 July 2017

27

James E Gern

1 reference

30 July 2017

Benjamin Nelson

5

1 reference

30 July 2017

Kristen M Patterson

7

1 reference

30 July 2017

Dara G Torgerson

9

1 reference

30 July 2017

Donglei Hu

10

1 reference

30 July 2017

Catherine Herman

11

1 reference

30 July 2017

Laura Vives

16

1 reference

30 July 2017

Lindsey A Roth

18

1 reference

30 July 2017

William Rodriguez-Cintron

19

1 reference

30 July 2017

Jose Rodriguez-Santana

20

1 reference

30 July 2017

Adam Davis

22

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30 July 2017

Kelley Meade

23

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30 July 2017

Michael A LeNoir

24

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30 July 2017

Shannon Thyne

25

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30 July 2017

Daniel J Jackson

26

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30 July 2017

language of work or name

English

0 references

publication date

12 August 2014

1 reference

30 July 2017

1 reference

30 July 2017

9

1 reference

30 July 2017

e104396

1 reference

30 July 2017

8

1 reference

Creative Commons Attribution 4.0 International

30 July 2017

start time

12 August 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

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Childhood obesity and asthma control in the GALA II and SAGE II studies

5 July 2018

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Multiplex targeted sequencing identifies recurrently mutated genes in autism spectrum disorders

5 July 2018

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An integrated map of genetic variation from 1,092 human genomes

5 July 2018

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Estimating the human mutation rate using autozygosity in a founder population

5 July 2018

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Optimal unified approach for rare-variant association testing with application to small-sample case-control whole-exome sequencing studies

5 July 2018

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Genome-wide association study to identify genetic determinants of severe asthma.

5 July 2018

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Case-control admixture mapping in Latino populations enriches for known asthma-associated genes

5 July 2018

1 reference

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Fast and accurate inference of local ancestry in Latino populations

5 July 2018

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Accurate imputation of rare and common variants in a founder population from a small number of sequenced individuals

5 July 2018

1 reference

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Resequencing candidate genes implicates rare variants in asthma susceptibility

5 July 2018

1 reference

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Simultaneous structural variation discovery among multiple paired-end sequenced genomes

5 July 2018

1 reference

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Identification of IL6R and chromosome 11q13.5 as risk loci for asthma

5 July 2018

1 reference

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Meta-analysis of genome-wide association studies of asthma in ethnically diverse North American populations

5 July 2018

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Genome-wide association study identifies three new susceptibility loci for adult asthma in the Japanese population

5 July 2018

1 reference

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Characterizing the impact of smoking and lung cancer on the airway transcriptome using RNA-Seq

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

A common spinal muscular atrophy deletion mutation is present on a single founder haplotype in the US Hutterites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

A framework for variation discovery and genotyping using next-generation DNA sequencing data

5 July 2018

1 reference

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Population-genetic properties of differentiated human copy-number polymorphisms

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Deletion of the ubiquitin ligase Nedd4L in lung epithelia causes cystic fibrosis-like disease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Diversity of human copy number variation and multicopy genes

5 July 2018

1 reference

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A map of human genome variation from population-scale sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

A large-scale, consortium-based genomewide association study of asthma

5 July 2018

1 reference

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mrsFAST: a cache-oblivious algorithm for short-read mapping.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

5 July 2018

1 reference

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ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

5 July 2018

1 reference

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Characterization of missing human genome sequences and copy-number polymorphic insertions

5 July 2018

1 reference

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Genome-wide association study of asthma identifies RAD50-IL13 and HLA-DR/DQ regions

5 July 2018

1 reference

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Variants of DENND1B associated with asthma in children

5 July 2018

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A genome-wide association study on African-ancestry populations for asthma

5 July 2018

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Origins and functional impact of copy number variation in the human genome

5 July 2018

1 reference

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Personalized copy number and segmental duplication maps using next-generation sequencing.

5 July 2018

1 reference

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Genome-wide association study implicates chromosome 9q21.31 as a susceptibility locus for asthma in mexican children

5 July 2018

1 reference

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Shades of gray: a comparison of linkage disequilibrium between Hutterites and Europeans

5 July 2018

1 reference

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Fast model-based estimation of ancestry in unrelated individuals

5 July 2018

1 reference

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Fast and accurate short read alignment with Burrows-Wheeler transform

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Genome-wide association analysis identifies PDE4D as an asthma-susceptibility gene

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Massively parallel exon capture and library-free resequencing across 16 genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Population analysis of large copy number variants and hotspots of human genetic disease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Deletion polymorphism upstream of IRGM associated with altered IRGM expression and Crohn's disease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Systematic assessment of copy number variant detection via genome-wide SNP genotyping

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Integrated detection and population-genetic analysis of SNPs and copy number variation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Genes in asthma: new genes and new ways

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Rare chromosomal deletions and duplications increase risk of schizophrenia

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

BatchPrimer3: a high throughput web application for PCR and sequencing primer design

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Effect of variation in CHI3L1 on serum YKL-40 level, risk of asthma, and lung function

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Rare structural variants disrupt multiple genes in neurodevelopmental pathways in schizophrenia

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

The fine-scale and complex architecture of human copy-number variation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Discovering susceptibility genes for asthma and allergy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Estimating local ancestry in admixed populations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Psoriasis is associated with increased beta-defensin genomic copy number

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

A second generation human haplotype map of over 3.1 million SNPs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Multiplex amplification of large sets of human exons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Case-control association testing with related individuals: a more powerful quasi-likelihood score test

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Genetic variants regulating ORMDL3 expression contribute to the risk of childhood asthma

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Challenges and standards in integrating surveys of structural variation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Mutational and selective effects on copy-number variants in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

FCGR3B copy number variation is associated with susceptibility to systemic, but not organ-specific, autoimmunity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Gene copy-number variation and associated polymorphisms of complement component C4 in human systemic lupus erythematosus (SLE): low copy number is a risk factor for and high copy number is a protective factor against SLE susceptibility in European A

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Strong association of de novo copy number mutations with autism

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Mapping autism risk loci using genetic linkage and chromosomal rearrangements

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

A chromosome 8 gene-cluster polymorphism with low human beta-defensin 2 gene copy number predisposes to Crohn disease of the colon

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Discovery of previously unidentified genomic disorders from the duplication architecture of the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Linkage disequilibrium and heritability of copy-number polymorphisms within duplicated regions of the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Distribution and intensity of constraint in mammalian genomic sequence

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Segmental duplications and copy-number variation in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

The influence of CCL3L1 gene-containing segmental duplications on HIV-1/AIDS susceptibility

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

The immunogenetics of asthma and eczema: a new focus on the epithelium

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Glutathione S transferase deficiency and passive smoking increase childhood asthma

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Lower Bronchodilator Responsiveness in Puerto Rican than in Mexican Subjects with Asthma

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Novel case-control test in a founder population identifies P-selectin as an atopy-susceptibility locus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Asthma genetics and intermediate phenotypes: a review from twin studies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

The genetic dissection of complex traits in a founder population

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

A second-generation genomewide screen for asthma-susceptibility alleles in a founder population

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4130548

Effects of glutathione-S-transferase M1, T1, and P1 on childhood lung function growth

5 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0104396

Glutathione S-transferase genotype increases risk of progression from bronchial hyperresponsiveness to asthma in adults

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0104396

Glutathione- S-transferase micro and theta gene polymorphisms as new risk factors of atopic bronchial asthma

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0104396

The association between glutathione S-transferase P1, M1 polymorphisms and asthma in Taiwanese schoolchildren

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0104396

Asthma mortality in U.S. Hispanics of Mexican, Puerto Rican, and Cuban heritage, 1990-1995.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0104396

Reported asthma among Puerto Rican, Mexican-American, and Cuban children, 1982 through 1984

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25116239

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0104396

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference