Gapped DNA and cyclization of short DNA fragments. (Q34190685)

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9 January 2020

title

Gapped DNA and cyclization of short DNA fragments (English)

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9 January 2020

3

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Maxim D. Frank-Kamenetskii

9 January 2020

4

object named as

Maxim Frank-Kamenetskii

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9 January 2020

Alexander Vologodskii

5

object named as

Alexander Vologodskii

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9 January 2020

author name string

Quan Du

1

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9 January 2020

Maria Vologodskaia

2

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9 January 2020

language of work or name

English

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publication date

18 March 2005

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9 January 2020

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9 January 2020

volume

88

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9 January 2020

issue

6

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9 January 2020

page(s)

4137-4145

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describes a project that uses

9 January 2020

ImageQuant

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11 June 2022

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inferred from PubMed Central ID database lookup

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Topological measurement of an A-tract bend angle: variation of duplex winding

28 July 2018

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Time-resolved fluorescence resonance energy transfer studies of DNA bending in double-stranded oligonucleotides and in DNA-protein complexes

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Simple and rapid preparation of gapped plasmid DNA for incorporation of oligomers containing specific DNA lesions

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The nicking endonuclease N.BstNBI is closely related to type IIs restriction endonucleases MlyI and PleI

28 July 2018

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Recent advances in FRET: distance determination in protein-DNA complexes

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Solution structure of an A-tract DNA bend

28 July 2018

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Global structure and mechanical properties of a 10-bp nucleosome positioning motif

28 July 2018

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Multimerization-cyclization of DNA fragments as a method of conformational analysis

28 July 2018

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Structure and dynamics of three-way DNA junctions: atomic force microscopy studies

28 July 2018

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Measurement of the DNA bend angle induced by the catabolite activator protein using Monte Carlo simulation of cyclization kinetics

28 July 2018

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The effect of ionic conditions on DNA helical repeat, effective diameter and free energy of supercoiling

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Conformational analysis of a 139 base-pair DNA fragment containing a single-stranded break and its interaction with human poly(ADP-ribose) polymerase

28 July 2018

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Four p53 DNA-binding domain peptides bind natural p53-response elements and bend the DNA.

28 July 2018

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28 July 2018

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28 July 2018

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DNA flexibility studied by covalent closure of short fragments into circles

28 July 2018

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Cyclization of Phage DNAs

28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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DNA bending induced by Cro protein binding as demonstrated by gel electrophoresis

28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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Topological measurement of an A-tract bend angle: comparison of the bent and straightened states

28 October 2018

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Tailoring the activity of restriction endonuclease PleI by PNA-induced DNA looping

28 October 2018

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Engineering a nicking endonuclease N.AlwI by domain swapping

28 October 2018

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28 October 2018

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28 October 2018

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Flexibility of single-stranded DNA: use of gapped duplex helices to determine the persistence lengths of poly(dT) and poly(dA)

28 October 2018

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12 December 2020

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Conformation of polyribouridylic acid in solution

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The conformation of single‐strand polynucleotides in solution: sedimentation studies of apurinic acid

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DNA bending in transcription initiation

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Application of the method of phage T4 DNA ligase-catalyzed ring-closure to the study of DNA structure. II. NaCl-dependence of DNA flexibility and helical repeat

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Torsional rigidity of DNA and length dependence of the free energy of DNA supercoiling

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10.1529/BIOPHYSJ.104.055657

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15778443%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

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9 January 2020

PubMed publication ID

15778443

1 reference