Molecular screening tools to study Arabidopsis transcription factors (Q34285741)

1 August 2017

title

Molecular screening tools to study Arabidopsis transcription factors (English)

1 reference

1 August 2017

Nora Wehner

1

1 reference

1 August 2017

Christoph Weiste

series ordinal

2

1 reference

1 August 2017

Wolfgang Dröge-Laser

series ordinal

3

1 reference

1 August 2017

publication date

4 November 2011

1 reference

Frontiers in Plant Science

1 August 2017

published in

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1 August 2017

volume

2

1 reference

1 August 2017

page(s)

68

1 reference

Speeding cis-trans regulation discovery by phylogenomic analyses coupled with screenings of an arrayed library of Arabidopsis transcription factors.

1 August 2017

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6 July 2018

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A high-throughput screening system for Arabidopsis transcription factors and its application to Med25-dependent transcriptional regulation

6 July 2018

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Improved protein-binding microarrays for the identification of DNA-binding specificities of transcription factors.

6 July 2018

1 reference

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AGRIS: the Arabidopsis Gene Regulatory Information Server, an update.

6 July 2018

1 reference

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Efficient yeast one-/two-hybrid screening using a library composed only of transcription factors in Arabidopsis thaliana

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Chromatin immunoprecipitation (ChIP) of plant transcription factors followed by sequencing (ChIP-SEQ) or hybridization to whole genome arrays (ChIP-CHIP).

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

High-throughput characterization of plant gene functions by using gain-of-function technology

6 July 2018

1 reference

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Comparative analyses of plant transcription factor databases.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Phenome analysis in plant species using loss-of-function and gain-of-function mutants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Functional analysis of transcription factors in Arabidopsis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Functional genomics using RIKEN Arabidopsis thaliana full-length cDNAs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

REGIA, an EU project on functional genomics of transcription factors from Arabidopsis Thaliana

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Post-translational regulation of plant bZIP factors.

6 July 2018

1 reference

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In planta ORFeome analysis by large-scale over-expression of GATEWAY-compatible cDNA clones: screening of ERF transcription factors involved in abiotic stress defense

6 July 2018

1 reference

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Analysis of transcriptional activation at a distance in Saccharomyces cerevisiae

6 July 2018

1 reference

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The FOX hunting system: an alternative gain-of-function gene hunting technique

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Transcription factor families in Arabidopsis: major progress and outstanding issues for future research

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Combinatorial control of Arabidopsis proline dehydrogenase transcription by specific heterodimerisation of bZIP transcription factors

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Two-hybrid protein-protein interaction analysis in Arabidopsis protoplasts: establishment of a heterodimerization map of group C and group S bZIP transcription factors.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Cloned sequence repertoires for small- and large-scale biology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Genome-wide analysis of the ERF gene family in Arabidopsis and rice

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Exploration of jasmonate signalling via automated and standardized transient expression assays in tobacco cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

A CELD-fusion method for rapid determination of the DNA-binding sequence specificity of novel plant DNA-binding proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

The tobacco bZIP transcription factor BZI-1 binds to G-box elements in the promoters of phenylpropanoid pathway genes in vitro, but it is not involved in their regulation in vivo.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Molecular cloning of an enhancer binding protein: isolation by screening of an expression library with a recognition site DNA

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

A novel genetic system to detect protein-protein interactions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Mapping in vivo protein-DNA interactions in plants by DamID, a DNA adenine methylation-based method.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

PlnTFDB: updated content and new features of the plant transcription factor database

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Nuclear accumulation of the ankyrin repeat protein ANK1 enhances the auxin-mediated transcription accomplished by the bZIP transcription factors BZI-1 and BZI-2.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Chromatin immunoprecipitation experiments to investigate in vivo binding of Arabidopsis transcription factors to target sequences.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Establishing RNA interference as a reverse-genetic approach for gene functional analysis in protoplasts

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

A central integrator of transcription networks in plant stress and energy signalling.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

A bacterial one-hybrid system for determining the DNA-binding specificity of transcription factors

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Regulation of transcription: from lambda to eukaryotes

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

Genome-wide ORFeome cloning and analysis of Arabidopsis transcription factor genes

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355788

DATF: a database of Arabidopsis transcription factors

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22645547

12 December 2020

inferred from PubMed ID database lookup

High-throughput protoplast transactivation (PTA) system for the analysis of Arabidopsis transcription factor function

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22645547

12 December 2020

inferred from PubMed ID database lookup

Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22645547

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.3389/FPLS.2011.00068

1 reference

release_rhykzh2qsrhf5ghcvb2ysivnry

1 August 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/rhykzh2qsrhf5ghcvb2ysivnry

24 November 2022

mapped directly with Wikidata item

PMC publication ID

3355788

1 reference

1 August 2017

1 reference