PlnTFDB: updated content and new features of the plant transcription factor database (Q42934100)

11 November 2017

PlnTFDB: updated content and new features of the plant transcription factor database (English)

1 reference

11 November 2017

Paulino Pérez-Rodríguez

1

1 reference

11 November 2017

Birgit Kersten

5

0 references

Bernd Müller-Röber

6

object named as

Bernd Mueller-Roeber

1 reference

11 November 2017

4

Stefan A Rensing

1 reference

Diego Mauricio Riaño Pachón

11 November 2017

2

object named as

Diego Mauricio Riaño-Pachón

1 reference

Luiz Gustavo Guedes Corrêa

11 November 2017

3

object named as

Luiz Gustavo Guedes Corrêa

1 reference

11 November 2017

language of work or name

English

0 references

publication date

25 October 2009

1 reference

11 November 2017

Nucleic Acids Research

1 reference

11 November 2017

38

1 reference

11 November 2017

Database issue

1 reference

11 November 2017

D822-7

1 reference

Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas

11 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The Sorghum bicolor genome and the diversification of grasses

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

A cross-species transcriptomics approach to identify genes involved in leaf development

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The role of bZIP transcription factors in green plant evolution: adaptive features emerging from four founder genes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Green transcription factors: a chlamydomonas overview.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

A high quality draft consensus sequence of the genome of a heterozygous grapevine variety

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The Pfam protein families database

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The Arabidopsis Information Resource (TAIR): gene structure and function annotation.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

PlantTFDB: a comprehensive plant transcription factor database

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The Chlamydomonas genome reveals the evolution of key animal and plant functions

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Orthology and functional conservation in eukaryotes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factors

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

PlnTFDB: an integrative plant transcription factor database

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

DBD: a transcription factor prediction database

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

An annotation update via cDNA sequence analysis and comprehensive profiling of developmental, hormonal or environmental responsiveness of the Arabidopsis AP2/EREBP transcription factor gene family

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The institute for genomic research Osa1 rice genome annotation database

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

WRKY transcription factors: from DNA binding towards biological function

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The role of GRAS proteins in plant signal transduction and development

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

BGI-RIS: an integrated information resource and comparative analysis workbench for rice genomics

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Adaptive evolution in the Arabidopsis MADS-box gene family inferred from its complete resolved phylogeny

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

GRASSIUS: a platform for comparative regulatory genomics across the grasses

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Genome-wide identification and evolutionary analysis of the plant specific SBP-box transcription factor family

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Dating the early evolution of plants: detection and molecular clock analyses of orthologs.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Contrasting modes of diversification in the Aux/IAA and ARF gene families

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

The GATA family of transcription factors in Arabidopsis and rice.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

PlanTAPDB, a phylogeny-based resource of plant transcription-associated proteins

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2808933

Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana

3 November 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKP805

Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19858103

12 December 2020

inferred from PubMed ID database lookup

The VARL gene family and the evolutionary origins of the master cell-type regulatory gene, regA, in Volvox carteri

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19858103

12 December 2020

inferred from PubMed ID database lookup

AGRIS and AtRegNet. a platform to link cis-regulatory elements and transcription factors into regulatory networks

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19858103

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/NAR/GKP805

1 reference

journals/nar/Perez-RodriguezRCRKM10

11 November 2017

1 reference

DBLP Dataset 2021-01-02

release_a55dewyrw5hgfazye6y7usbbd4

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/a55dewyrw5hgfazye6y7usbbd4

24 November 2022

mapped directly with Wikidata item

1 reference

11 November 2017

PubMed publication ID

19858103

1 reference