Complete pipeline for Infinium(®) Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation. (Q34300885)

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Complete pipeline for Infinium((R)) Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation

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English	Complete pipeline for Infinium(®) Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation.	scientific article	Complete pipeline for Infinium((R)) Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation

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scholarly article

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4 February 2020

Complete pipeline for Infinium(®) Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation (English)

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4 February 2020

DNA methylation

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data processing

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based on heuristic

inferred from title

2

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4 February 2020

author name string

Nizar Touleimat

1

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publication date

1 June 2012

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4 February 2020

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4 February 2020

4

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4 February 2020

3

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4 February 2020

325-341

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4 February 2020

DNA methylation: an introduction to the biology and the disease-associated changes of a promising biomarker.

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21 January 2018

Epigenetic alterations as cancer diagnostic, prognostic, and predictive biomarkers

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Next-generation sequencing technologies for DNA methylation analyses in cancer genomics

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Principles and challenges of genomewide DNA methylation analysis

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21 January 2018

Epigenome-wide association studies for common human diseases

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Genome-wide DNA methylation patterns in CD4+ T cells from patients with systemic lupus erythematosus

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Identification of type 1 diabetes-associated DNA methylation variable positions that precede disease diagnosis.

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Genome-wide survey reveals predisposing diabetes type 2-related DNA methylation variations in human peripheral blood

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21 January 2018

Genome-wide DNA methylation profiling using Infinium® assay

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21 January 2018

The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

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Quantitative comparison of genome-wide DNA methylation mapping technologies.

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Genome-scale screen for DNA methylation-based detection markers for ovarian cancer

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21 January 2018

Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome

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High density DNA methylation array with single CpG site resolution

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IMA: an R package for high-throughput analysis of Illumina's 450K Infinium methylation data

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lumi: a pipeline for processing Illumina microarray

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Independent filtering increases detection power for high-throughput experiments

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Accurate genome-scale percentage DNA methylation estimates from microarray data

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Comprehensive high-throughput arrays for relative methylation (CHARM).

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Batch effect correction for genome-wide methylation data with Illumina Infinium platform

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Independent surrogate variable analysis to deconvolve confounding factors in large-scale microarray profiling studies.

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