Comet: an open-source MS/MS sequence database search tool (Q34311405)

1 August 2017

Comet: an open-source MS/MS sequence database search tool (English)

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1 August 2017

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Jimmy K Eng

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1 August 2017

Tahmina A Jahan

2

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PubMed ID

23148064

1 August 2017

Michael R Hoopmann

series ordinal

3

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1 August 2017

4 December 2012

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1 August 2017

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1 August 2017

13

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1 August 2017

22-24

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1 August 2017

1

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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

1 August 2017

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

Selected reaction monitoring-based proteomics: workflows, potential, pitfalls and future directions

21 January 2018

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https://api.crossref.org/works/10.1002%2FPMIC.201200439

Proteomics on an Orbitrap benchtop mass spectrometer using all-ion fragmentation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

Precursor acquisition independent from ion count: how to dive deeper into the proteomics ocean.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

Accurate peptide fragment mass analysis: multiplexed peptide identification and quantification

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

A common open representation of mass spectrometry data and its application to proteomics research

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

MS1, MS2, and SQT-three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

A uniform proteomics MS/MS analysis platform utilizing open XML file formats

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

A fast SEQUEST cross correlation algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

TANDEM: matching proteins with tandem mass spectra

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

Open mass spectrometry search algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

Proteomic and phosphoproteomic comparison of human ES and iPS cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

The International Protein Index: an integrated database for proteomics experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

Statistical significance for genomewide studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

A statistical model for identifying proteins by tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

Semi-supervised learning for peptide identification from shotgun proteomics datasets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

Rapid and accurate peptide identification from tandem mass spectra

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

Improving sensitivity by probabilistically combining results from multiple MS/MS search methodologies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

FDRAnalysis: a tool for the integrated analysis of tandem mass spectrometry identification results from multiple search engines

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201200439

mzML--a community standard for mass spectrometry data

21 January 2018

1 reference

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1074/MCP.R110.000133

Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis

1 reference

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1074/MCP.O111.016717

Identifiers

DOI

10.1002/PMIC.201200439

1 reference

1 August 2017

1 reference

PubMed ID

23148064