Dynamic viral populations in hypersaline systems as revealed by metagenomic assembly (Q34330674)

1 August 2017

title

Dynamic viral populations in hypersaline systems as revealed by metagenomic assembly (English)

1 reference

1 August 2017

1 reference

Joanne B Emerson

1

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Karla B. Heidelberg

object named as

Karla B Heidelberg

series ordinal

5

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Jillian Banfield

series ordinal

6

object named as

Jillian F Banfield

1 reference

1 August 2017

4

Eric E Allen

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1 August 2017

Brian C Thomas

2

1 reference

1 August 2017

Karen Andrade

series ordinal

3

1 reference

1 August 2017

language of work or name

English

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publication date

6 July 2012

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Applied and Environmental Microbiology

1 August 2017

published in

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1 August 2017

volume

78

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1 August 2017

issue

17

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1 August 2017

page(s)

6309-6320

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Reconstructing viral genomes from the environment using fosmid clones: the case of haloviruses

1 August 2017

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Diversity of virus-host systems in hypersaline Lake Retba, Senegal

6 July 2018

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Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments

6 July 2018

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The metavirome of a hypersaline environment.

6 July 2018

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Prodigal: prokaryotic gene recognition and translation initiation site identification

6 July 2018

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Viral and microbial community dynamics in four aquatic environments.

6 July 2018

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6 July 2018

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6 July 2018

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New dimensions of the virus world discovered through metagenomics

6 July 2018

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6 July 2018

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Explaining microbial population genomics through phage predation.

6 July 2018

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Current insights into phage biodiversity and biogeography

6 July 2018

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An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope.

6 July 2018

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6 July 2018

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Amplification of uncultured single-stranded DNA viruses from rice paddy soil

6 July 2018

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Prokaryotic diversity in Tuz Lake, a hypersaline environment in Inland Turkey

6 July 2018

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Virus population dynamics and acquired virus resistance in natural microbial communities

6 July 2018

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Assembly of viral metagenomes from yellowstone hot springs

6 July 2018

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Velvet: algorithms for de novo short read assembly using de Bruijn graphs

6 July 2018

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Functional metagenomic profiling of nine biomes

6 July 2018

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The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples

6 July 2018

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6 July 2018

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Virus movement maintains local virus population diversity

6 July 2018

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Sequence analysis of an Archaeal virus isolated from a hypersaline lake in Inner Mongolia, China

6 July 2018

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6 July 2018

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Rapidly evolving CRISPRs implicated in acquired resistance of microorganisms to viruses.

6 July 2018

1 reference

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Marine viruses--major players in the global ecosystem

6 July 2018

1 reference

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Virus-host interactions in salt lakes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

Metagenomic approach to the study of halophages: the environmental halophage 1.

6 July 2018

1 reference

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Genome dynamics in a natural archaeal population

6 July 2018

1 reference

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Lineages of acidophilic archaea revealed by community genomic analysis

6 July 2018

1 reference

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The marine viromes of four oceanic regions

6 July 2018

1 reference

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Seasonal variations in virus-host populations in Norwegian coastal waters: focusing on the cyanophage community infecting marine Synechococcus spp.

6 July 2018

1 reference

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Microbial diversity in Maras salterns, a hypersaline environment in the Peruvian Andes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

Viruses as partners in spring bloom microbial trophodynamics.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

The genome of Salinibacter ruber: convergence and gene exchange among hyperhalophilic bacteria and archaea

6 July 2018

1 reference

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Photosynthesis genes in marine viruses yield proteins during host infection

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

Genome sequencing in microfabricated high-density picolitre reactors

6 July 2018

1 reference

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Constituents of SH1, a novel lipid-containing virus infecting the halophilic euryarchaeon Haloarcula hispanica

6 July 2018

1 reference

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InterProScan: protein domains identifier

6 July 2018

1 reference

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6 July 2018

1 reference

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PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information

6 July 2018

1 reference

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Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea

6 July 2018

1 reference

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Combined use of cultivation-dependent and cultivation-independent methods indicates that members of most haloarchaeal groups in an Australian crystallizer pond are cultivable.

6 July 2018

1 reference

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Haloviruses HF1 and HF2: evidence for a recent and large recombination event

6 July 2018

1 reference

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Community structure and metabolism through reconstruction of microbial genomes from the environment

6 July 2018

1 reference

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Marine ecosystems: bacterial photosynthesis genes in a virus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

Haloarchaeal viruses: how diverse are they?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

Demonstration of a sensory rhodopsin in eubacteria

6 July 2018

1 reference

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Natrialba magadii virus phiCh1: first complete nucleotide sequence and functional organization of a virus infecting a haloalkaliphilic archaeon

6 July 2018

1 reference

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HF2: a double-stranded DNA tailed haloarchaeal virus with a mosaic genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

Population dynamics of chesapeake bay virioplankton: total-community analysis by pulsed-field gel electrophoresis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

Consed: a graphical tool for sequence finishing

6 July 2018

1 reference

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Diversity of alkaliphilic halobacteria: proposals for transfer of Natronobacterium vacuolatum, Natronobacterium magadii, and Natronobacterium pharaonis to Halorubrum, Natrialba, and Natronomonas gen. nov., respectively, as Halorubrum vacuolatum comb

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

Global network of specific virus-host interactions in hypersaline environments.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

27 October 2018

Bacteriophage genomics

1 reference

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His1 and His2 are distantly related, spindle-shaped haloviruses belonging to the novel virus group, Salterprovirus

27 October 2018

1 reference

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Virioplankton community structure along a salinity gradient in a solar saltern.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

Pulsed-field gel electrophoresis analysis of virus assemblages present in a hypersaline environment

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

The archaeal halophilic virus-encoded Dam-like methyltransferase M. phiCh1-I methylates adenine residues and complements dam mutants in the low salt environment of Escherichia coli.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416638

Occurrence of virus-like particles in the Dead Sea.

27 October 2018

1 reference

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27 October 2018

Identifiers

DOI

10.1128/AEM.01212-12

1 reference

1 August 2017

1 reference

1 August 2017

1 reference