High-coverage ITS primers for the DNA-based identification of ascomycetes and basidiomycetes in environmental samples. (Q34342482)

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8 February 2020

title

High-coverage ITS primers for the DNA-based identification of ascomycetes and basidiomycetes in environmental samples (English)

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8 February 2020

1

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8 February 2020

Akifumi S Tanabe

series ordinal

2

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8 February 2020

author name string

Satoshi Yamamoto

series ordinal

3

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8 February 2020

Hirotoshi Sato

series ordinal

4

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8 February 2020

language of work or name

English

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publication date

12 July 2012

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8 February 2020

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8 February 2020

volume

7

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8 February 2020

issue

7

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8 February 2020

page(s)

e40863

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Creative Commons Attribution 4.0 International

8 February 2020

copyright license

start time

12 July 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

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6 July 2018

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454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

6 July 2018

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ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases

6 July 2018

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6 July 2018

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Negative plant-soil feedback predicts tree-species relative abundance in a tropical forest

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Production of ectomycorrhizal mycelium peaks during canopy closure in Norway spruce forests

6 July 2018

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6 July 2018

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Seasonally dynamic fungal communities in the Quercus macrocarpa phyllosphere differ between urban and nonurban environments

6 July 2018

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Characterization of the oral fungal microbiome (mycobiome) in healthy individuals

6 July 2018

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454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

6 July 2018

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Massively parallel 454 sequencing indicates hyperdiverse fungal communities in temperate Quercus macrocarpa phyllosphere

6 July 2018

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A DNA barcode for land plants

6 July 2018

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DNA barcoding for ecologists

6 July 2018

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Cereal mycorrhiza: an ancient symbiosis in modern agriculture.

6 July 2018

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Use of the ITS primers, ITS1F and ITS4, to characterize fungal abundance and diversity in mixed-template samples by qPCR and length heterogeneity analysis

6 July 2018

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Biosorption of heavy metals by Saccharomyces cerevisiae: a review

6 July 2018

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Fungal community analysis by large-scale sequencing of environmental samples

6 July 2018

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Fungal-specific PCR primers developed for analysis of the ITS region of environmental DNA extracts

6 July 2018

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MAFFT version 5: improvement in accuracy of multiple sequence alignment

6 July 2018

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Biologically active compounds from Aphyllophorales (polypore) fungi

6 July 2018

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PCAP: a whole-genome assembly program

6 July 2018

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Natural products as antiparasitic drugs.

6 July 2018

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Biological identifications through DNA barcodes

6 July 2018

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Evolution and variation of the yeast (Saccharomyces) genome

6 July 2018

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6 July 2018

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ITS primers with enhanced specificity for basidiomycetes--application to the identification of mycorrhizae and rusts

6 July 2018

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The magnitude of fungal diversity: the 1.5 million species estimate revisited

6 July 2018

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Fungal epiphytes and endophytes of coffee leaves (Coffea arabica).

21 January 2018

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Parasitic chytrids: their effects on phytoplankton communities and food-web dynamics

21 January 2018

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The parasitic chytrid, Zygorhizidium, facilitates the growth of the cladoceran zooplankter, Daphnia, in cultures of the inedible alga, Asterionella.

21 January 2018

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Progress in molecular and morphological taxon discovery in Fungi and options for formal classification of environmental sequences

21 January 2018

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Towards standardization of the description and publication of next-generation sequencing datasets of fungal communities

21 January 2018

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A PCR-based method for diet analysis in freshwater organisms using 18S rDNA barcoding on faeces

21 January 2018

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Cryptic species and host specificity in the ectomycorrhizal genus Strobilomyces (Strobilomycetaceae).

21 January 2018

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Alien plants associate with widespread generalist arbuscular mycorrhizal fungal taxa: evidence from a continental-scale study using massively parallel 454 sequencing

21 January 2018

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454-sequencing reveals stochastic local reassembly and high disturbance tolerance within arbuscular mycorrhizal fungal communities

21 January 2018

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Intraspecific ITS variability in the kingdom fungi as expressed in the international sequence databases and its implications for molecular species identification.

21 January 2018

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DNA barcoding of lichenized fungi demonstrates high identification success in a floristic context

27 October 2018

1 reference

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Reproductive isolation among cryptic species in the ectomycorrhizal genus Strobilomyces: population-level CAPS marker-based genetic analysis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22808280

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0040863

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22808280%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22808280%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

PubMed publication ID

22808280

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22808280%20AND%20SRC:MED&resulttype=core&format=json