Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy. (Q34342958)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23644491%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

title

Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy (English)

1 reference

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29 February 2020

1 reference

3

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29 February 2020

Lena Ho

5

1 reference

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29 February 2020

1

Cigall Kadoch

1 reference

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29 February 2020

7

Gerald R Crabtree

1 reference

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29 February 2020

author name string

Diana C Hargreaves

2

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29 February 2020

Laura Elias

4

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29 February 2020

Jeff Ranish

6

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29 February 2020

language of work or name

English

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publication date

5 May 2013

1 reference

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29 February 2020

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29 February 2020

volume

45

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29 February 2020

issue

6

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29 February 2020

page(s)

592-601

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The genetic landscape of mutations in Burkitt lymphoma

29 February 2020

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6 July 2018

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6 July 2018

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6 July 2018

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BAP1 loss defines a new class of renal cell carcinoma

6 July 2018

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Whole-genome sequencing of liver cancers identifies etiological influences on mutation patterns and recurrent mutations in chromatin regulators

6 July 2018

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Melanoma genome sequencing reveals frequent PREX2 mutations

6 July 2018

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Integrated analysis of somatic mutations and focal copy-number changes identifies key genes and pathways in hepatocellular carcinoma

6 July 2018

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The clonal and mutational evolution spectrum of primary triple-negative breast cancers

6 July 2018

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SS18 together with animal-specific factors defines human BAF-type SWI/SNF complexes

6 July 2018

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Discovery and prioritization of somatic mutations in diffuse large B-cell lymphoma (DLBCL) by whole-exome sequencing

6 July 2018

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Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma

6 July 2018

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6 July 2018

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EZH2 codon 641 mutations are common in BCL2-rearranged germinal center B cell lymphomas

6 July 2018

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Exome sequencing identifies recurrent mutations of the splicing factor SF3B1 gene in chronic lymphocytic leukemia

6 July 2018

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Identification of a core member of the SWI/SNF complex, BAF155/SMARCC1, as a human tumor suppressor gene

6 July 2018

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Exome sequencing identifies frequent mutation of ARID1A in molecular subtypes of gastric cancer

6 July 2018

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6 July 2018

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6 July 2018

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Frequent mutations of chromatin remodeling genes in transitional cell carcinoma of the bladder

6 July 2018

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Inactivating mutations of the chromatin remodeling gene ARID2 in hepatocellular carcinoma

6 July 2018

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6 July 2018

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Exome sequencing of head and neck squamous cell carcinoma reveals inactivating mutations in NOTCH1

6 July 2018

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The mutational landscape of head and neck squamous cell carcinoma

6 July 2018

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Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma

6 July 2018

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esBAF facilitates pluripotency by conditioning the genome for LIF/STAT3 signalling and by regulating polycomb function

6 July 2018

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MicroRNA-mediated conversion of human fibroblasts to neurons.

6 July 2018

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Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia

6 July 2018

1 reference

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Exome sequencing identifies GRIN2A as frequently mutated in melanoma

6 July 2018

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6 July 2018

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6 July 2018

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Exome sequencing identifies somatic mutations of DNA methyltransferase gene DNMT3A in acute monocytic leukemia

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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Exome sequencing identifies frequent mutation of the SWI/SNF complex gene PBRM1 in renal carcinoma

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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ARID1A mutations in endometriosis-associated ovarian carcinomas

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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MicroRNA-mediated switching of chromatin-remodelling complexes in neural development

6 July 2018

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An embryonic stem cell chromatin remodeling complex, esBAF, is essential for embryonic stem cell self-renewal and pluripotency

6 July 2018

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Human fetal hemoglobin expression is regulated by the developmental stage-specific repressor BCL11A.

6 July 2018

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BRD7, a novel PBAF-specific SWI/SNF subunit, is required for target gene activation and repression in embryonic stem cells

6 July 2018

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Comprehensive genomic characterization defines human glioblastoma genes and core pathways

6 July 2018

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Core signaling pathways in human pancreatic cancers revealed by global genomic analyses

6 July 2018

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An integrated genomic analysis of human glioblastoma multiforme

6 July 2018

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SWI/SNF mediates polycomb eviction and epigenetic reprogramming of the INK4b-ARF-INK4a locus

6 July 2018

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An essential switch in subunit composition of a chromatin remodeling complex during neural development

6 July 2018

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Genomic and functional evidence for an ARID1A tumor suppressor role

6 July 2018

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Genetic polymorphisms in DPF3 associated with risk of breast cancer and lymph node metastases

6 July 2018

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ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex

6 July 2018

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t(5;14)/HOX11L2-positive T-cell acute lymphoblastic leukemia. A collaborative study of the Groupe Français de Cytogénétique Hématologique (GFCH).

6 July 2018

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Identification of a polymorphic, neuron-specific chromatin remodeling complex

6 July 2018

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Aberrations of the hSNF5/INI1 gene are restricted to malignant rhabdoid tumors or atypical teratoid/rhabdoid tumors in pediatric solid tumors

6 July 2018

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Selectivity of chromatin-remodelling cofactors for ligand-activated transcription

6 July 2018

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The BCL11 gene family: involvement of BCL11A in lymphoid malignancies

6 July 2018

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The murine SNF5/INI1 chromatin remodeling factor is essential for embryonic development and tumor suppression

6 July 2018

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Haploinsufficiency of Snf5 (integrase interactor 1) predisposes to malignant rhabdoid tumors in mice

6 July 2018

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BRG1, a component of the SWI-SNF complex, is mutated in multiple human tumor cell lines

6 July 2018

1 reference

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BRG-1 is required for RB-mediated cell cycle arrest

6 July 2018

1 reference

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Familial posterior fossa brain tumors of infancy secondary to germline mutation of the hSNF5 gene

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667980

Constitutional mutations of the hSNF5/INI1 gene predispose to a variety of cancers

6 July 2018

1 reference

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Germ-line and acquired mutations of INI1 in atypical teratoid and rhabdoid tumors

6 July 2018

1 reference

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Rapid and phosphoinositol-dependent binding of the SWI/SNF-like BAF complex to chromatin after T lymphocyte receptor signaling

6 July 2018

1 reference

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Truncating mutations of hSNF5/INI1 in aggressive paediatric cancer

6 July 2018

1 reference

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RSC, an essential, abundant chromatin-remodeling complex

6 July 2018

1 reference

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Purification and biochemical heterogeneity of the mammalian SWI-SNF complex

6 July 2018

1 reference

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Diversity and specialization of mammalian SWI/SNF complexes

6 July 2018

1 reference

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BRG1 contains a conserved domain of the SWI2/SNF2 family necessary for normal mitotic growth and transcription

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667980

Identification of novel genes, SYT and SSX, involved in the t(X;18)(p11.2;q11.2) translocation found in human synovial sarcoma

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667980

The retinoblastoma protein and BRG1 form a complex and cooperate to induce cell cycle arrest

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667980

Identification of two alternative fusion genes, SYT-SSX1 and SYT-SSX2, in t(X; 18)(p11.2;q11.2)-positive synoviaol sarcomas

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667980

Fusion of SYT to two genes, SSX1 and SSX2, encoding proteins with homology to the Kruppel-associated box in human synovial sarcoma

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667980

Structural studies on Escherichia coli ribosomes. 3. Denaturation and sedimentation of ribosomal subunits unfolded in urea

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667980

Detachment of ribosomal proteins by salt. II. Some properties of protein-deficient particles formed by the detachment of ribosomal proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667980

Detachment of ribosomal proteins by salt. I. Effect of conditions on the amount of protein detached

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667980

SMARCC1 expression is upregulated in prostate cancer and positively correlated with tumour recurrence and dedifferentiation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667980

Gene expression profiling and identification of novel prognostic marker genes in neuroblastoma

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667980

Concomitant down-regulation of BRM and BRG1 in human tumor cell lines: differential effects on RB-mediated growth arrest vs CD44 expression.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667980

Bcl11: sibling rivalry in lymphoid development

27 October 2018

1 reference

12 December 2020

Exome sequencing of gastric adenocarcinoma identifies recurrent somatic mutations in cell adhesion and chromatin remodeling genes

1 reference

12 December 2020

A study of the atypical ribosomal RNA components of Rhodopseudomonas spheroides

1 reference

12 December 2020

Mutational analysis of EZH2 codon 641 in non-Hodgkin lymphomas and leukemias

1 reference

12 December 2020

Integrated genomic analyses of ovarian carcinoma

1 reference

7 January 2021

Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes

1 reference

7 January 2021

Comprehensive molecular portraits of human breast tumours

1 reference

7 January 2021

The BCL11B tumor suppressor is mutated across the major molecular subtypes of T-cell acute lymphoblastic leukemia

1 reference

7 January 2021

Reversible disruption of mSWI/SNF (BAF) complexes by the SS18-SSX oncogenic fusion in synovial sarcoma

1 reference

7 January 2021

Identifiers

DOI

10.1038/NG.2628

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23644491%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23644491%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

PubMed publication ID

23644491

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23644491%20AND%20SRC:MED&resulttype=core&format=json