Natural selection on coding and noncoding DNA sequences is associated with virulence genes in a plant pathogenic fungus. (Q34366773)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25193312%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

title

Natural selection on coding and noncoding DNA sequences is associated with virulence genes in a plant pathogenic fungus (English)

1 reference

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16 February 2020

1

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16 February 2020

Michael Thon

5

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16 February 2020

author name string

José M Sanz-Martín

2

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16 February 2020

Maria Anisimova

3

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16 February 2020

Serenella A Sukno

4

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16 February 2020

publication date

4 September 2014

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Genome Biology and Evolution

16 February 2020

published in

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16 February 2020

volume

6

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16 February 2020

issue

9

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16 February 2020

page(s)

2368-2379

1 reference

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Apoplastic immunity and its suppression by filamentous plant pathogens

16 February 2020

cites work

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6 July 2018

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Genome evolution in filamentous plant pathogens: why bigger can be better

6 July 2018

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The Top 10 fungal pathogens in molecular plant pathology

6 July 2018

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Genes under positive selection in a model plant pathogenic fungus, Botrytis

6 July 2018

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Methods to detect selection on noncoding DNA

6 July 2018

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Evolution of adaptive phenotypic traits without positive Darwinian selection

6 July 2018

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The making of a new pathogen: insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species

6 July 2018

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SignalP 4.0: discriminating signal peptides from transmembrane regions

6 July 2018

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Whole-genome and chromosome evolution associated with host adaptation and speciation of the wheat pathogen Mycosphaerella graminicola

6 July 2018

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Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control

6 July 2018

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Natural selection on cis and trans regulation in yeasts

6 July 2018

1 reference

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Genomics of biotrophy in fungi and oomycetes--emerging patterns

6 July 2018

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Contrasts between adaptive coding and noncoding changes during human evolution

6 July 2018

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Finding candidate genes under positive selection in Non-model species: examples of genes involved in host specialization in pathogens

6 July 2018

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A catalog of neutral and deleterious polymorphism in yeast

6 July 2018

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Mapping short DNA sequencing reads and calling variants using mapping quality scores

6 July 2018

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Patterns of positive selection in six Mammalian genomes

6 July 2018

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Positive and negative selection on noncoding DNA in Drosophila simulans

6 July 2018

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Duplicated paralogous genes subject to positive selection in the genome of Trypanosoma brucei

6 July 2018

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Hitchhiking effects of recurrent beneficial amino acid substitutions in the Drosophila melanogaster genome

6 July 2018

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Promoter regions of many neural- and nutrition-related genes have experienced positive selection during human evolution.

6 July 2018

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Divergence of transcription factor binding sites across related yeast species

6 July 2018

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Recombination and linkage disequilibrium in Arabidopsis thaliana.

6 July 2018

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The evolution of gene expression QTL in Saccharomyces cerevisiae

6 July 2018

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6 July 2018

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Patterns and rates of intron divergence between humans and chimpanzees

6 July 2018

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The evolutionary significance of cis-regulatory mutations

6 July 2018

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Genomic selective constraints in murid noncoding DNA

6 July 2018

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AgBase: a functional genomics resource for agriculture

6 July 2018

1 reference

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Direct protein interaction underlies gene-for-gene specificity and coevolution of the flax resistance genes and flax rust avirulence genes

6 July 2018

1 reference

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Neutral and adaptive variation in gene expression

6 July 2018

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PHI-base: a new database for pathogen host interactions

6 July 2018

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Fungal secondary metabolism - from biochemistry to genomics

6 July 2018

1 reference

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Natural selection on protein-coding genes in the human genome

6 July 2018

1 reference

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Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

6 July 2018

1 reference

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Evidence for widespread degradation of gene control regions in hominid genomes

6 July 2018

1 reference

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Conservation and evolution of cis-regulatory systems in ascomycete fungi

6 July 2018

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HyPhy: hypothesis testing using phylogenies

6 July 2018

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Detecting selection in noncoding regions of nucleotide sequences

6 July 2018

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Promoter and intronic variants affect the transcriptional regulation of the human dopamine transporter gene

6 July 2018

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How introns influence and enhance eukaryotic gene expression

6 July 2018

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Translational control by the 3'-UTR: the ends specify the means.

6 July 2018

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CPR1: a gene encoding a putative signal peptidase that functions in pathogenicity of Colletotrichum graminicola to maize

6 July 2018

1 reference

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Rapid evolution in plant chitinases: molecular targets of selection in plant-pathogen coevolution.

6 July 2018

1 reference

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A serotonin transporter gene intron 2 polymorphic region, correlated with affective disorders, has allele-dependent differential enhancer-like properties in the mouse embryo

6 July 2018

1 reference

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Positive Darwinian selection after gene duplication in primate ribonuclease genes

6 July 2018

1 reference

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The arg2 gene of Trichoderma virens: cloning and development of a homologous transformation system

6 July 2018

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Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

6 July 2018

1 reference

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Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

6 July 2018

1 reference

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Adaptive protein evolution at the Adh locus in Drosophila

6 July 2018

1 reference

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Positive Darwinian evolution in human influenza A viruses

6 July 2018

1 reference

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Evolution at two levels in humans and chimpanzees

6 July 2018

1 reference

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What is a functional genetic polymorphism? Defining classes of functionality

6 July 2018

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Adaptive evolution of non-coding DNA in Drosophila

21 January 2018

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The Biology of Corn Anthracnose: Knowledge to Exploit for Improved Management

21 January 2018

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Hypervariable noncoding sequences in Saccharomyces cerevisiae

21 January 2018

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Serotonin transporter promoter and intron 2 polymorphisms: relationship between allelic variants and gene expression

21 January 2018

1 reference

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Positive and negative selection on noncoding DNA close to protein-coding genes in wild house mice.

21 January 2018

1 reference

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Detecting positive selection in the budding yeast genome

21 January 2018

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3' UTRs are the primary regulators of gene expression in the C. elegans germline

21 January 2018

1 reference

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Root infection and systemic colonization of maize by Colletotrichum graminicola.

21 January 2018

1 reference

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The relationship between non-protein-coding DNA and eukaryotic complexity.

21 January 2018

1 reference

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Adaptive evolution has targeted the C-terminal domain of the RXLR effectors of plant pathogenic oomycetes.

21 January 2018

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Accuracy and power of the likelihood ratio test in detecting adaptive molecular evolution

21 January 2018

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12 December 2020

Variation in gene expression within and among natural populations

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12 December 2020

Evolutionary biology: fruitfly genome is not junk

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12 December 2020

Plant defense mechanisms are activated during biotrophic and necrotrophic development of Colletotricum graminicola in maize

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12 December 2020

IS THERE A CONSTANT FITNESS VALUE FOR A GIVEN GENOTYPE? NO!

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12 December 2020

Identifiers

DOI

10.1093/GBE/EVU192

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25193312%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25193312%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

PubMed publication ID

25193312

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25193312%20AND%20SRC:MED&resulttype=core&format=json