Crystal structures of A-DNA duplexes (Q34421190)

2 August 2017

1 reference

title

Crystal structures of A-DNA duplexes (English)

1 reference

2 August 2017

1 reference

Wahl MC

1

1 reference

2 August 2017

Sundaralingam M

series ordinal

2

1 reference

2 August 2017

publication date

1 January 1997

1 reference

2 August 2017

1 reference

2 August 2017

volume

44

1 reference

2 August 2017

issue

1

1 reference

2 August 2017

page(s)

45-63

1 reference

The nucleic acid database. A comprehensive relational database of three-dimensional structures of nucleic acids

2 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

The conformation of the DNA double helix in the crystal is dependent on its environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

The structure of sodium thymonucleate fibres. I. The influence of water content

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

The crystal structure of d(CCCCGGGG): a new A-form variant with an extended backbone conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

New crystal structures of nucleic acids and their complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Molecular structure of the octamer d(G-G-C-C-G-G-C-C): modified A-DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Helix geometry and hydration in an A-DNA tetramer: IC-C-G-G

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Molecular structure of a complete turn of A-DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Alternating and non-alternating dG-dC hexanucleotides crystallize as canonical A-DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Influence of counter-ions on the crystal structures of DNA decamers: binding of [Co(NH3)6]3+ and Ba2+ to A-DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Crystallographic structure of an RNA helix: [U(UA)6A]2

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Base pair buckling can eliminate the interstrand purine clash at the CpG steps in B-DNA caused by the base pair propeller twisting

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

The definition of generalized helicoidal parameters and of axis curvature for irregular nucleic acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Local variability and base sequence effects in DNA crystal structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Nucleic acid structure analysis: a users guide to a collection of new analysis programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Neomycin, spermine and hexaamminecobalt (III) share common structural motifs in converting B- to A-DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Crystal structure of the B-DNA hexamer d(CTCGAG): model for an A-to-B transition

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

A single 2'-hydroxyl group converts B-DNA to A-DNA. Crystal structure of the DNA-RNA chimeric decamer duplex d(CCGGC)r(G)d(CCGG) with a novel intermolecular G-C base-paired quadruplet

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Crystal structure of the highly distorted chimeric decamer r(C)d(CGGCGCCG)r(G).spermine complex--spermine binding to phosphate only and minor groove tertiary base-pairing

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Molecular structure of a left-handed double helical DNA fragment at atomic resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Crystal structure of the self-complementary 5'-purine start decamer d(GCGCGCGCGC) in the Z-DNA conformation. I.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Crystal structure of the self-complementary 5'-purine start decamer d(GCACGCGTGC) in the A-DNA conformation. II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

A note on crystal packing and global helix structure in short A-DNA duplexes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Hexagonal crystal structure of the A-DNA octamer d(GTGTACAC) and its comparison with the tetragonal structure: correlated variations in helical parameters

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

"...the tyranny of the lattice...".

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Effect of a single 3'-methylene phosphonate linkage on the conformation of an A-DNA octamer double helix

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Crystal structure analysis of an A-DNA fragment at 1.8 A resolution: d(GCCCGGGC)

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Crystal structure of the A-DNA decamer d(CCIGGCCm5CGG) at 1.6 A showing the unexpected wobble I.m5C base pair

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Effects of methylation on a synthetic polynucleotide: the B--Z transition in poly(dG-m5dC).poly(dG-m5dC).

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Molecular structure of (m5 dC-dG)3: the role of the methyl group on 5-methyl cytosine in stabilizing Z-DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Refined crystal structure of an octanucleotide duplex with G . T mismatched base-pairs

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Structures of the mismatched duplex d(GGGTGCCC) and one of its Watson-Crick analogues d(GGGCGCCC)

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Codon--anticodon pairing: the wobble hypothesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

G . T base-pairs in a DNA helix: the crystal structure of d(G-G-G-G-T-C-C-C)

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Refined crystal structure of an octanucleotide duplex with I.T. mismatched base pairs

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Binding of two distamycin A molecules in the minor groove of an alternating B–DNA duplex

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Ordered water structure in an A-DNA octamer at 1.7 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Hydration patterns and intermolecular interactions in A-DNA crystal structures. Implications for DNA recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Highly structured water network in crystals of a deoxydinucleoside---drug complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Hydration of nucleic acid crystals

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

A systematic study of patterns of hydration in nucleic acids:(I) guanine and cytosine

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Hydration of DNA bases: analysis of crystallographic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

A systematic method for studying the spatial distribution of water molecules around nucleic acid bases

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

The structure and hydration of the A-DNA fragment d(GGGTACCC) at room temperature and low temperature

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Base-pair opening and spermine binding—B-DNA features displayed in the crystal structure of a gal operon fragment: implications for protein-DNA recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Base only binding of spermine in the deep groove of the A-DNA octamer d(GTGTACAC)

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Crystal and solution structures of the oligonucleotide d(ATGCGCAT)2: a combined X-ray and NMR study

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

The crystal structure of d(GGATGGGAG): an essential part of the binding site for transcription factor IIIA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

The TFIIIA recognition fragment d(GGATGGGAG).d(CTCCCATCC) is B-form in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

The crystal structure of d(G-G-G-G-C-C-C-C). A model for poly(dG).poly(dC)

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Determinants of repressor/operator recognition from the structure of the trp operator binding site.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

X-ray structure of the DNase I-d(GGTATACC)2 complex at 2.3 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Crystal structure of a yeast TBP/TATA-box complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Co-crystal structure of TBP recognizing the minor groove of a TATA element

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Water: an integral part of nucleic acid structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Coexistence of A- and B-form DNA in a single crystal lattice

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Molecular and crystal structure of the polynucleotide complex: Polyinosinic acid plus polydeoxycytidylic acid

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Structures of synthetic polynucleotides in the A-RNA and A′-RNA conformations: X-ray diffraction analyses of the molecular conformations of polyadenylic acid · polyuridylic acid and polyinosinic acid · polycytidylic acid

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Crystalline A-dna: the X-ray analysis of the fragment d(G-G-T-A-T-A-C-C)

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

THE MOLECULAR CONFIGURATION OF DEOXYRIBONUCLEIC ACID. IV. X-RAY DIFFRACTION STUDY OF THE A FORM

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Optimised parameters for A-DNA and B-DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Different intrastrand and interstrand contributions to stacking account for roll variations at the alternating purine-pyrimidine sequences in A-DNA and A-RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Mechanics of sequence-dependent stacking of bases in B-DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Base sequence and helix structure variation in B and A DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Letter: The structure of polydeoxyguanylic acid with polydeoxycytidylic acid

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Raman spectra of single crystals of r(GCG)d(CGC) and d(CCCCGGGG) as models for A DNA, their structure transitions in aqueous solution, and comparison with double-helical poly(dG).poly(dC)

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Short oligodeoxynucleotides with d(G-C)n sequence do not assume left-handed conformation in high salt conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

The potentially Z-DNA-forming sequence d(GTGTACAC) crystallizes as A-DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

The crystal structure of d(GGm5CCGGCC): the effect of methylation on A-DNA structure and stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

High resolution crystal structure of the A-DNA decamer d(CCCGGCCGGG). Novel intermolecular base-paired G*(G.C) triplets

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Crystal packing effects on A-DNA helix parameters: a comparative study of the isoforms of the tetragonal & hexagonal family of octamers with differing base sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Crystal structure of domain A of Thermus flavus 5S rRNA and the contribution of water molecules to its structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Ordered water structure around a B-DNA dodecamer. A quantitative study

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Solvent distribution in crystals of B- and Z-oligomers

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Low-temperature study of the A-DNA fragment d(GGGCGCCC)

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

Nuclear magnetic resonance studies of polyamine binding to a defined DNA sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

A novel form of the DNA double helix imposed on the TATA-box by the TATA-binding protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F%28SICI%291097-0282%281997%2944%3A1%3C45%3A%3AAID-BIP4%3E3.0.CO%3B2-%23

10.1002/(SICI)1097-0282(1997)44:1<45::AID-BIP4>3.0.CO;2-#

21 January 2018

Identifiers

DOI

1 reference

2 August 2017

1 reference